RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 SLC12A4Q9UP95 1085 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 EMSYQ7Z589 1322 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 USP17L10C9JJH3 530 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 DDX3XO00571 662 aaKnown RBP eCLIP7.28□□□□□ -1.24
SCAPER-203ENST00000538941 STAM2O75886 525 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 PECAM1P16284 738 aaPredicted RBP7.28□□□□□ -1.24
SCAPER-203ENST00000538941 DRG2P55039 364 aaKnown RBP7.28□□□□□ -1.24
SCAPER-203ENST00000538941 AUHQ13825 339 aaKnown RBP7.28□□□□□ -1.24
SCAPER-203ENST00000538941 EMC10Q5UCC4 262 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 CLEC4GQ6UXB4 293 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.28□□□□□ -1.24
SCAPER-203ENST00000538941 RHOT1Q8IXI2 618 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 PDIK1LQ8N165 341 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 C4orf33Q8N1A6 199 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 TAB3Q8N5C8 712 aaPredicted RBP7.28□□□□□ -1.24
SCAPER-203ENST00000538941 NKX2-3Q8TAU0 364 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 CKAP2Q8WWK9 683 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 CELF1Q92879 486 aaKnown RBP7.28□□□□□ -1.24
SCAPER-203ENST00000538941 ABTB1Q969K4 478 aaPredicted RBP7.28□□□□□ -1.24
SCAPER-203ENST00000538941 RMDN2Q96LZ7 410 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 ZNF577Q9BSK1 485 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 PSMC3IPQ9P2W1 217 aaPredicted RBP7.28□□□□□ -1.24
SCAPER-203ENST00000538941 LRCH1Q9Y2L9 728 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 UBE4BO95155 1302 aa7.28□□□□□ -1.24
SCAPER-203ENST00000538941 ABLIM1O14639 778 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 LPXNO60711 386 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 AP1G2O75843 785 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 TTC4O95801 387 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 KRT16P08779 473 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 NMT1P30419 496 aaKnown RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 MAGEA4P43358 317 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 CENPCQ03188 943 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 PDIA2Q13087 525 aaKnown RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 MTFR1Q15390 333 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 MAP7D1Q3KQU3 841 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 BBS9Q3SYG4 887 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 RBM26Q5T8P6 1007 aaKnown RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 TTBK2Q6IQ55 1244 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 CRLF3Q8IUI8 442 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 ATP11CQ8NB49 1132 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 XXYLT1Q8NBI6 393 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 HES6Q96HZ4 224 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 NSL1Q96IY1 281 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 MYLK2Q9H1R3 596 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 CHCHD3Q9NX63 227 aaKnown RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 MTO1Q9Y2Z2 717 aaKnown RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 ZC3H4Q9UPT8 1303 aaKnown RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 MYH8P13535 1937 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 DCDC2CA8MYV0 355 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 COPEO14579 308 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 KIAA0391O15091 583 aaKnown RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 ROR2Q01974 943 aaKnown RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 GPS1Q13098 491 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 DMP1Q13316 513 aaPredicted RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 TMED1Q13445 227 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 P3H1Q32P28 736 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 CCDC14Q49A88 953 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 NLRP9Q7RTR0 991 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 PIP4K2CQ8TBX8 421 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 ALKBH8Q96BT7 664 aaKnown RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 TSSK1BQ9BXA7 367 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 RANBP17Q9H2T7 1088 aaKnown RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 TTC7AQ9ULT0 858 aaPredicted RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 FLT1P17948 1338 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 CAPN9O14815 690 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 TBX3O15119 743 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 DKC1O60832 514 aaKnown RBP eCLIP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 PIK3CAP42336 1068 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 TMPRSS15P98073 1019 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 GRAMD1BQ3KR37 738 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 CERKLQ49MI3 558 aaPredicted RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 POMGNT1Q8WZA1 660 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 EIF2AK1Q9BQI3 630 aaKnown RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 TRAF3IP3Q9Y228 551 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 THRAP3Q9Y2W1 955 aaKnown RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 NCANO14594 1321 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 TPD52L2O43399 206 aaKnown RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 TLR2O60603 784 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 UBTFL6P0CB48 400 aaPredicted RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 GTF2IP78347 998 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 BLMHQ13867 455 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 ZNF268Q14587 947 aaPredicted RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 RASA3Q14644 834 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 EPHA7Q15375 998 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 DNAL1Q4LDG9 190 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 TAF1BQ53T94 588 aaPredicted RBP7.27□□□□□ -1.25
SCAPER-203ENST00000538941 LVRNQ6Q4G3 990 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 RGS9BPQ6ZS82 235 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 C16orf86Q6ZW13 317 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 FBXO33Q7Z6M2 555 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 EBF2Q9HAK2 575 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 IL1RAPL1Q9NZN1 696 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 PNMA3Q9UL41 463 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 NEU2Q9Y3R4 380 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 PCDHB4Q9Y5E5 795 aa7.27□□□□□ -1.25
SCAPER-203ENST00000538941 ZNF335Q9H4Z2 1342 aaPredicted RBP7.26□□□□□ -1.25
SCAPER-203ENST00000538941 ATP9AO75110 1047 aa7.26□□□□□ -1.25
SCAPER-203ENST00000538941 AKAP3O75969 853 aa7.26□□□□□ -1.25
SCAPER-203ENST00000538941 VEGFAP15692 232 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms