RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PDLIM7Q9NR12 457 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 NFS1Q9Y697 457 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 KRT5P13647 590 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 MCCD1P59942 119 aaPredicted RBP26.77■■□□□ 1.88
RAB40C-204ENST00000538492 PPARDQ03181 441 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 DHX9Q08211 1270 aaKnown RBP26.77■■□□□ 1.88
RAB40C-204ENST00000538492 KDM7AQ6ZMT4 941 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 MCPH1Q8NEM0 835 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 C18orf8Q96DM3 657 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 SYNGAP1Q96PV0 1343 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 RAB17Q9H0T7 212 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 ATP6V0A4Q9HBG4 840 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 ADAMTS5Q9UNA0 930 aa26.77■■□□□ 1.88
RAB40C-204ENST00000538492 ZEB2O60315 1214 aa26.76■■□□□ 1.87
RAB40C-204ENST00000538492 CCT5P48643 541 aa26.76■■□□□ 1.87
RAB40C-204ENST00000538492 CDR2Q01850 454 aa26.76■■□□□ 1.87
RAB40C-204ENST00000538492 GUCY1A3Q02108 690 aa26.76■■□□□ 1.87
RAB40C-204ENST00000538492 TCEAL1Q15170 157 aa26.76■■□□□ 1.87
RAB40C-204ENST00000538492 CYFIP1Q7L576 1253 aa26.76■■□□□ 1.87
RAB40C-204ENST00000538492 TEX13BQ9BXU2 312 aa26.76■■□□□ 1.87
RAB40C-204ENST00000538492 TMBIM4Q9HC24 238 aa26.76■■□□□ 1.87
RAB40C-204ENST00000538492 MYH9P35579 1960 aaKnown RBP26.76■■□□□ 1.87
RAB40C-204ENST00000538492 TRIM66O15016 1216 aa26.76■■□□□ 1.87
RAB40C-204ENST00000538492 OAZ1P54368 228 aa26.76■■□□□ 1.87
RAB40C-204ENST00000538492 ZNF844Q08AG5 666 aa26.76■■□□□ 1.87
RAB40C-204ENST00000538492 LRIG3Q6UXM1 1119 aa26.76■■□□□ 1.87
RAB40C-204ENST00000538492 IFT74Q96LB3 600 aa26.76■■□□□ 1.87
RAB40C-204ENST00000538492 ACAD9Q9H845 621 aa26.76■■□□□ 1.87
RAB40C-204ENST00000538492 MYZAPP0CAP1 466 aa26.75■■□□□ 1.87
RAB40C-204ENST00000538492 HPDP32754 393 aaPredicted RBP26.75■■□□□ 1.87
RAB40C-204ENST00000538492 PEX5P50542 639 aa26.75■■□□□ 1.87
RAB40C-204ENST00000538492 SP2Q02086 613 aa26.75■■□□□ 1.87
RAB40C-204ENST00000538492 PRKG1Q13976 671 aa26.75■■□□□ 1.87
RAB40C-204ENST00000538492 BRDTQ58F21 947 aaPredicted RBP26.75■■□□□ 1.87
RAB40C-204ENST00000538492 ABHD15Q6UXT9 468 aa26.75■■□□□ 1.87
RAB40C-204ENST00000538492 ERP44Q9BS26 406 aa26.75■■□□□ 1.87
RAB40C-204ENST00000538492 HMGB1P1B2RPK0 211 aaPredicted RBP26.75■■□□□ 1.87
RAB40C-204ENST00000538492 SPOPO43791 374 aa26.75■■□□□ 1.87
RAB40C-204ENST00000538492 DKC1O60832 514 aaKnown RBP eCLIP26.75■■□□□ 1.87
RAB40C-204ENST00000538492 USP37Q86T82 979 aa26.75■■□□□ 1.87
RAB40C-204ENST00000538492 ZDHHC14Q8IZN3 488 aa26.75■■□□□ 1.87
RAB40C-204ENST00000538492 RPS6KC1Q96S38 1066 aa26.75■■□□□ 1.87
RAB40C-204ENST00000538492 PYGMP11217 842 aa26.74■■□□□ 1.87
RAB40C-204ENST00000538492 JAMLQ86YT9 394 aa26.74■■□□□ 1.87
RAB40C-204ENST00000538492 ZNF526Q8TF50 670 aaPredicted RBP26.74■■□□□ 1.87
RAB40C-204ENST00000538492 DDX1Q92499 740 aaKnown RBP26.74■■□□□ 1.87
RAB40C-204ENST00000538492 FMO2Q99518 471 aa26.74■■□□□ 1.87
RAB40C-204ENST00000538492 BRCA1P38398 1863 aaKnown RBP26.74■■□□□ 1.87
RAB40C-204ENST00000538492 IRX5P78411 483 aaPredicted RBP26.74■■□□□ 1.87
RAB40C-204ENST00000538492 DUPD1Q68J44 220 aa26.74■■□□□ 1.87
RAB40C-204ENST00000538492 CATSPERGQ6ZRH7 1159 aa26.74■■□□□ 1.87
RAB40C-204ENST00000538492 C10orf67Q8IYJ2 551 aa26.74■■□□□ 1.87
RAB40C-204ENST00000538492 PRELID2Q8N945 189 aa26.74■■□□□ 1.87
RAB40C-204ENST00000538492 TMEM143Q96AN5 459 aa26.74■■□□□ 1.87
RAB40C-204ENST00000538492 C12orf42Q96LP6 360 aa26.74■■□□□ 1.87
RAB40C-204ENST00000538492 ATP8A1Q9Y2Q0 1164 aa26.74■■□□□ 1.87
RAB40C-204ENST00000538492 MTA2O94776 668 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 CYP1A2P05177 515 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 PPP2R5EQ16537 467 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 GNPTABQ3T906 1256 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 ZNF516Q92618 1163 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 CDHR1Q96JP9 859 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 BCCIPQ9P287 314 aaKnown RBP eCLIP26.73■■□□□ 1.87
RAB40C-204ENST00000538492 ARHGAP28Q9P2N2 729 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 GTF3C4Q9UKN8 822 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 SNX24Q9Y343 169 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 NFASCO94856 1347 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 TCRBV7S2A1N4TA0A589 114 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 SPATA31C2B4DYI2 1134 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 MYO1FO00160 1098 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 PEX10O60683 326 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 LIG4P49917 911 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 FSTL1Q12841 308 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 MTMR3Q13615 1198 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 LLGL1Q15334 1064 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 SEL1L2Q5TEA6 688 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 CD101Q93033 1021 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 WNT8AQ9H1J5 351 aa26.73■■□□□ 1.87
RAB40C-204ENST00000538492 ZNF541Q9H0D2 1346 aa26.72■■□□□ 1.87
RAB40C-204ENST00000538492 C19orf81C9J6K1 198 aa26.72■■□□□ 1.87
RAB40C-204ENST00000538492 GARTP22102 1010 aa26.72■■□□□ 1.87
RAB40C-204ENST00000538492 GTF2H1P32780 548 aa26.72■■□□□ 1.87
RAB40C-204ENST00000538492 POLGP54098 1239 aaPredicted RBP26.72■■□□□ 1.87
RAB40C-204ENST00000538492 CLUL1Q15846 466 aa26.72■■□□□ 1.87
RAB40C-204ENST00000538492 MIS18BP1Q6P0N0 1132 aa26.72■■□□□ 1.87
RAB40C-204ENST00000538492 MAGOHBQ96A72 148 aaKnown RBP26.72■■□□□ 1.87
RAB40C-204ENST00000538492 FZD9O00144 591 aa26.72■■□□□ 1.87
RAB40C-204ENST00000538492 GRIN3BO60391 1043 aa26.72■■□□□ 1.87
RAB40C-204ENST00000538492 PHF2O75151 1096 aa26.72■■□□□ 1.87
RAB40C-204ENST00000538492 WNT7BP56706 349 aa26.72■■□□□ 1.87
RAB40C-204ENST00000538492 DHX34Q14147 1143 aaKnown RBP26.72■■□□□ 1.87
RAB40C-204ENST00000538492 EMC2Q15006 297 aa26.72■■□□□ 1.87
RAB40C-204ENST00000538492 C1orf131Q8NDD1 294 aaKnown RBP26.72■■□□□ 1.87
RAB40C-204ENST00000538492 SUPT20HL2P0C7V6 817 aa26.71■■□□□ 1.87
RAB40C-204ENST00000538492 ACOT2P49753 483 aa26.71■■□□□ 1.87
RAB40C-204ENST00000538492 PLTPP55058 493 aa26.71■■□□□ 1.87
RAB40C-204ENST00000538492 SUPT20HL1Q3ZLR7 823 aa26.71■■□□□ 1.87
RAB40C-204ENST00000538492 TTC27Q6P3X3 843 aa26.71■■□□□ 1.87
RAB40C-204ENST00000538492 TRPM4Q8TD43 1214 aa26.71■■□□□ 1.87
RAB40C-204ENST00000538492 CNOT8Q9UFF9 292 aaKnown RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms