RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 TMEM117Q9H0C3 514 aa21.17■□□□□ 0.98
EFCAB11-202ENST00000538485 PDE11AQ9HCR9 933 aa21.17■□□□□ 0.98
EFCAB11-202ENST00000538485 TRMT13Q9NUP7 481 aaKnown RBP21.17■□□□□ 0.98
EFCAB11-202ENST00000538485 CPSF3Q9UKF6 684 aaKnown RBP21.17■□□□□ 0.98
EFCAB11-202ENST00000538485 CLDN10P78369 228 aa21.16■□□□□ 0.98
EFCAB11-202ENST00000538485 CATSPER4Q7RTX7 472 aa21.16■□□□□ 0.98
EFCAB11-202ENST00000538485 CELF4Q9BZC1 486 aaKnown RBP21.16■□□□□ 0.98
EFCAB11-202ENST00000538485 RNF208Q9H0X6 261 aa21.16■□□□□ 0.98
EFCAB11-202ENST00000538485 CCL5P13501 91 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 MXI1P50539 228 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 OSTNP61366 133 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 MRPS6P82932 125 aaKnown RBP21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 ZBED6P86452 979 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 HSP90AA2PQ14568 343 aaPredicted RBP21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 PCBP1Q15365 356 aaKnown RBP eCLIP21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 TRIM65Q6PJ69 517 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 CCDC51Q96ER9 411 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 FAM84AQ96KN4 292 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 DNAJC7Q99615 494 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 BAG1Q99933 345 aaPredicted RBP21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 SIX2Q9NPC8 291 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 PLCB1Q9NQ66 1216 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 ESPNB1AK53 854 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 P4HA2O15460 535 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 POLR2FP61218 127 aaKnown RBP21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 RPAINQ86UA6 219 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 RSPH3Q86UC2 560 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 BRSK2Q8IWQ3 736 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 CCDC112Q8NEF3 446 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 OR8K1Q8NGG5 319 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 LMO3Q8TAP4 145 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 ZNF516Q92618 1163 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 FNBP1Q96RU3 617 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 GANQ9H2C0 597 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 STARD7Q9NQZ5 370 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 PHF24Q9UPV7 400 aa21.15■□□□□ 0.98
EFCAB11-202ENST00000538485 PTPRJQ12913 1337 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 KBTBD13C9JR72 458 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 PMM2O15305 246 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 STX10O60499 249 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 N4BP1O75113 896 aaKnown RBP21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 LRRN2O75325 713 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 MCF2P10911 925 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 HSPA8P11142 646 aaKnown RBP21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 PTPN11Q06124 597 aaPredicted RBP21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 KLHDC7AQ5VTJ3 777 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 LMBRD2Q68DH5 695 aaPredicted RBP21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 KRT39Q6A163 491 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 SV2AQ7L0J3 742 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 TMEM192Q8IY95 271 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 BAP1Q92560 729 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 TMEM8AQ9HCN3 771 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 NLRC4Q9NPP4 1024 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 CEP72Q9P209 647 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 CDY2AQ9Y6F7 541 aa21.14■□□□□ 0.97
EFCAB11-202ENST00000538485 CHRNA1P02708 482 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 CTSHP09668 335 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 UCHL3P15374 230 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 TNNI1P19237 187 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 GTF2H1P32780 548 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 EPC2Q52LR7 807 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 CACNA2D4Q7Z3S7 1137 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 SLC43A3Q8NBI5 491 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 ZNF397Q8NF99 534 aaPredicted RBP21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 EDEM3Q9BZQ6 932 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 M0QZ92 97 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 DNM1LO00429 736 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 NCBP1Q09161 790 aaKnown RBP21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 CETN1Q12798 172 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 ENOX2Q16206 610 aaKnown RBP21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 CTU1Q7Z7A3 348 aaKnown RBP21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 KIAA1524Q8TCG1 905 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 INTS2Q9H0H0 1204 aaKnown RBP21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 NOD1Q9Y239 953 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 TRPV2Q9Y5S1 764 aa21.13■□□□□ 0.97
EFCAB11-202ENST00000538485 FECHP22830 423 aa21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 MSNP26038 577 aaKnown RBP21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 THPOP40225 353 aa21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 PTK7Q13308 1070 aa21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 WDR59Q6PJI9 974 aa21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 C15orf39Q6ZRI6 1047 aa21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 RRAGAQ7L523 313 aa21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 EHBP1Q8NDI1 1231 aa21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 DHX38Q92620 1227 aaKnown RBP21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 ADPGKQ9BRR6 497 aa21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 SENP6Q9GZR1 1112 aaPredicted RBP21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 OGDHLQ9ULD0 1010 aa21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 COQ4Q9Y3A0 265 aa21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 NOC2LQ9Y3T9 749 aaKnown RBP21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 FHOD1Q9Y613 1164 aa21.12■□□□□ 0.97
EFCAB11-202ENST00000538485 LRRC53A6NM62 1247 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 NRDCO43847 1150 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 RPLP2P05387 115 aaKnown RBP21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 STAG3L1P0CL83 205 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 CXCL8P10145 99 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 MGAT3Q09327 533 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 NOTUMQ6P988 496 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 GJB7Q6PEY0 223 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 TAS1R2Q8TE23 839 aa21.11■□□□□ 0.97
EFCAB11-202ENST00000538485 SEMA4DQ92854 862 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms