RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 CHGBP05060 677 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 CCDC166P0CW27 439 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 YY1P25490 414 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 VHLP40337 213 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 UBA7P41226 1012 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 SLC18A1P54219 525 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 RPL26P61254 145 aaKnown RBP7.21□□□□□ -1.26
USP28-207ENST00000538475 GPLD1P80108 840 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 PKN1Q16512 942 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 FAM26DQ5JW98 314 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 HGSNATQ68CP4 663 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 DTHD1Q6ZMT9 781 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 CEP128Q6ZU80 1094 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 HFE2Q6ZVN8 426 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 TRMT10CQ7L0Y3 403 aaKnown RBP7.21□□□□□ -1.26
USP28-207ENST00000538475 KRT26Q7Z3Y9 468 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 TRIM74Q86UV6 250 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 TRIM73Q86UV7 250 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 IFNL3Q8IZI9 196 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 SRBD1Q8N5C6 995 aaKnown RBP7.21□□□□□ -1.26
USP28-207ENST00000538475 ZNF398Q8TD17 642 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 TRPM4Q8TD43 1214 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 ASAP3Q8TDY4 903 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 PIGOQ8TEQ8 1089 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 MAIP1Q8WWC4 291 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 DNAJC9Q8WXX5 260 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 OPTNQ96CV9 577 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 FGD4Q96M96 766 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 SERPINB12Q96P63 405 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 PLEKHG4BQ96PX9 1271 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 TSG101Q99816 390 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 ELAC2Q9BQ52 826 aaKnown RBP7.21□□□□□ -1.26
USP28-207ENST00000538475 SPZ1Q9BXG8 430 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 ZMYND12Q9H0C1 365 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 BLZF1Q9H2G9 400 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 TLE6Q9H808 572 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 SLC52A2Q9HAB3 445 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 SAR1AQ9NR31 198 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 EHD2Q9NZN4 543 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 NAGPAQ9UK23 515 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 MTMR7Q9Y216 660 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 SSX2IPQ9Y2D8 614 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 GDAQ9Y2T3 454 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 C2CD2Q9Y426 696 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 RPS6KL1Q9Y6S9 549 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 COMMD3-BMI1R4GMX3 469 aa7.21□□□□□ -1.26
USP28-207ENST00000538475 A0A1B0GUL6 1792 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 TCRBV5S4A2TA0A5A2 114 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 LRRC53A6NM62 1247 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 C1QTNF9BB2RNN3 333 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 ZBTB42B2RXF5 422 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 FAM229AH3BQW9 127 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 KRIT1O00522 736 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 DCTN3O75935 186 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 APBA3O96018 575 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 KRT16P08779 473 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 TPBGLP0DKB5 382 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 ZBTB48P10074 688 aaPredicted RBP7.2□□□□□ -1.26
USP28-207ENST00000538475 NID1P14543 1247 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 CPA3P15088 417 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 EIF2AK2P19525 551 aaKnown RBP7.2□□□□□ -1.26
USP28-207ENST00000538475 SP100P23497 879 aaPredicted RBP7.2□□□□□ -1.26
USP28-207ENST00000538475 CXCR5P32302 372 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 GUCY1A2P33402 732 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 SCNN1AP37088 669 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 PRKCIP41743 596 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 SLC1A4P43007 532 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 GNAQP50148 359 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 PMS2P54278 862 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 PTENP60484 403 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 POU5F1Q01860 360 aaKnown RBP7.2□□□□□ -1.26
USP28-207ENST00000538475 PLAURQ03405 335 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 ADAM9Q13443 819 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 SEC23AQ15436 765 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 GNPTABQ3T906 1256 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 PABPC1LQ4VXU2 614 aaKnown RBP7.2□□□□□ -1.26
USP28-207ENST00000538475 HHATQ5VTY9 493 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 DUPD1Q68J44 220 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 ANKRD40Q6AI12 368 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 OR52E8Q6IFG1 317 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 PPP1R21Q6ZMI0 780 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 RGS9BPQ6ZS82 235 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 RRAGAQ7L523 313 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 CATIPQ7Z7H3 387 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 VPS36Q86VN1 386 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 ERICH1Q86X53 443 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 LRRC43Q8N309 656 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 C4orf32Q8N8J7 132 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 CNBD1Q8NA66 436 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 DAGLBQ8NCG7 672 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 PIP4K2CQ8TBX8 421 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 CKAP2Q8WWK9 683 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 ESR2Q92731 530 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 PTPRN2Q92932 1015 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 AZIN2Q96A70 460 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 FAM136AQ96C01 138 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 MS4A14Q96JA4 679 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 OLFM3Q96PB7 478 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 IWS1Q96ST2 819 aa7.2□□□□□ -1.26
USP28-207ENST00000538475 ERP44Q9BS26 406 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms