RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 TMEM143Q96AN5 459 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 BICD1Q96G01 975 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 RNPC3Q96LT9 517 aaKnown RBP15.09■□□□□ 0.01
LIMK1-208ENST00000538333 ZIM3Q96PE6 472 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 NIFKQ9BYG3 293 aaKnown RBP15.09■□□□□ 0.01
LIMK1-208ENST00000538333 CTTNBP2NLQ9P2B4 639 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 FBXO40Q9UH90 709 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 NR2E1Q9Y466 385 aa15.09■□□□□ 0.01
LIMK1-208ENST00000538333 ZNF233A6NK53 670 aa15.08■□□□□ 0.01
LIMK1-208ENST00000538333 GRIN3BO60391 1043 aa15.08■□□□□ 0.01
LIMK1-208ENST00000538333 HSF2BPO75031 334 aa15.08■□□□□ 0.01
LIMK1-208ENST00000538333 ZC3H11AO75152 810 aaKnown RBP eCLIP15.08■□□□□ 0.01
LIMK1-208ENST00000538333 PIGRP01833 764 aa15.08■□□□□ 0.01
LIMK1-208ENST00000538333 ARL2P36404 184 aa15.08■□□□□ 0.01
LIMK1-208ENST00000538333 CDR2Q01850 454 aa15.08■□□□□ 0.01
LIMK1-208ENST00000538333 PSPC1Q8WXF1 523 aaKnown RBP15.08■□□□□ 0.01
LIMK1-208ENST00000538333 PIK3R5Q8WYR1 880 aa15.08■□□□□ 0.01
LIMK1-208ENST00000538333 DHX38Q92620 1227 aaKnown RBP15.08■□□□□ 0.01
LIMK1-208ENST00000538333 ELMO3Q96BJ8 720 aa15.08■□□□□ 0.01
LIMK1-208ENST00000538333 FAM84AQ96KN4 292 aa15.08■□□□□ 0.01
LIMK1-208ENST00000538333 PCYT2Q99447 389 aa15.08■□□□□ 0.01
LIMK1-208ENST00000538333 HAPLN2Q9GZV7 340 aa15.08■□□□□ 0.01
LIMK1-208ENST00000538333 KIAA1586Q9HCI6 787 aa15.08■□□□□ 0.01
LIMK1-208ENST00000538333 AMACRQ9UHK6 382 aa15.08■□□□□ 0.01
LIMK1-208ENST00000538333 GSTTP1A0A1W2PQM5 241 aa15.08■□□□□ 0
LIMK1-208ENST00000538333 CCDC66A2RUB6 948 aa15.08■□□□□ 0
LIMK1-208ENST00000538333 SOWAHBA6NEL2 793 aa15.08■□□□□ 0
LIMK1-208ENST00000538333 FARP2O94887 1054 aaPredicted RBP15.08■□□□□ 0
LIMK1-208ENST00000538333 CYP1A2P05177 515 aa15.08■□□□□ 0
LIMK1-208ENST00000538333 SCP2P22307 547 aa15.08■□□□□ 0
LIMK1-208ENST00000538333 NAMPTP43490 491 aa15.08■□□□□ 0
LIMK1-208ENST00000538333 LIG4P49917 911 aa15.08■□□□□ 0
LIMK1-208ENST00000538333 PDE6CP51160 858 aa15.08■□□□□ 0
LIMK1-208ENST00000538333 GUCY2FP51841 1108 aa15.08■□□□□ 0
LIMK1-208ENST00000538333 WNT7BP56706 349 aa15.08■□□□□ 0
LIMK1-208ENST00000538333 PSMD6Q15008 389 aa15.08■□□□□ 0
LIMK1-208ENST00000538333 RPS6KC1Q96S38 1066 aa15.08■□□□□ 0
LIMK1-208ENST00000538333 PI4K2AQ9BTU6 479 aa15.08■□□□□ 0
LIMK1-208ENST00000538333 MIF4GDA9UHW6 222 aaKnown RBP15.07■□□□□ 0
LIMK1-208ENST00000538333 ATMINO43313 823 aaPredicted RBP15.07■□□□□ 0
LIMK1-208ENST00000538333 OPA1O60313 960 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 CAPN2P17655 700 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 HSPA9P38646 679 aaKnown RBP15.07■□□□□ 0
LIMK1-208ENST00000538333 TARBP2Q15633 366 aaKnown RBP15.07■□□□□ 0
LIMK1-208ENST00000538333 CRELD2Q6UXH1 353 aaPredicted RBP15.07■□□□□ 0
LIMK1-208ENST00000538333 ENOSF1Q7L5Y1 443 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 PROCA1Q8NCQ7 364 aaPredicted RBP15.07■□□□□ 0
LIMK1-208ENST00000538333 SPATC1LQ9H0A9 340 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 CHORDC1Q9UHD1 332 aaPredicted RBP15.07■□□□□ 0
LIMK1-208ENST00000538333 GOLGA6CA6NDK9 693 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 GOLGA8KD6RF30 607 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 KIAA0391O15091 583 aaKnown RBP15.07■□□□□ 0
LIMK1-208ENST00000538333 GOLGA6DP0CG33 693 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 ACTN2P35609 894 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 NLRP11P59045 1033 aaKnown RBP15.07■□□□□ 0
LIMK1-208ENST00000538333 PTENP60484 403 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 STRN3Q13033 797 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 ZACNQ401N2 412 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 MAATS1Q7Z4T9 603 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 DDX42Q86XP3 938 aaKnown RBP eCLIP15.07■□□□□ 0
LIMK1-208ENST00000538333 CCDC26Q8TAB7 109 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 KRT35Q92764 455 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 CD101Q93033 1021 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 GOLGA6AQ9NYA3 693 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 GTF3C4Q9UKN8 822 aa15.07■□□□□ 0
LIMK1-208ENST00000538333 AGO2Q9UKV8 859 aaKnown RBP15.07■□□□□ 0
LIMK1-208ENST00000538333 ADM5C9JUS6 153 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 TULP1O00294 542 aaPredicted RBP15.06■□□□□ 0
LIMK1-208ENST00000538333 TTI1O43156 1089 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 DDNO94850 711 aaPredicted RBP15.06■□□□□ 0
LIMK1-208ENST00000538333 C4BPAP04003 597 aaKnown RBP15.06■□□□□ 0
LIMK1-208ENST00000538333 EDN1P05305 212 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 MARCKSL1P49006 195 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 PEX5P50542 639 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 HNRNPH2P55795 449 aaKnown RBP15.06■□□□□ 0
LIMK1-208ENST00000538333 PPFIA1Q13136 1202 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 ZNF211Q13398 564 aaPredicted RBP15.06■□□□□ 0
LIMK1-208ENST00000538333 TTMPQ5BVD1 217 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 GOLGA6L1Q8N7Z2 621 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 FAM76AQ8TAV0 307 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 SLC7A3Q8WY07 619 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 ARL8AQ96BM9 186 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 NAP1L3Q99457 506 aaPredicted RBP15.06■□□□□ 0
LIMK1-208ENST00000538333 ZSWIM1Q9BR11 485 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 NEUROG2Q9H2A3 272 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 ERVK-5Q9HDB9 667 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 TRPC6Q9Y210 931 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 CSADQ9Y600 493 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 PTPRJQ12913 1337 aa15.06■□□□□ 0
LIMK1-208ENST00000538333 A0A0G2JLL6 359 aaPredicted RBP15.05■□□□□ 0
LIMK1-208ENST00000538333 LRRIQ4A6NIV6 560 aa15.05■□□□□ 0
LIMK1-208ENST00000538333 RPS6KA5O75582 802 aa15.05■□□□□ 0
LIMK1-208ENST00000538333 COMTP21964 271 aa15.05■□□□□ 0
LIMK1-208ENST00000538333 ACOT2P49753 483 aa15.05■□□□□ 0
LIMK1-208ENST00000538333 CFAP58Q5T655 872 aa15.05■□□□□ 0
LIMK1-208ENST00000538333 TDRD10Q5VZ19 366 aaKnown RBP15.05■□□□□ 0
LIMK1-208ENST00000538333 NAA35Q5VZE5 725 aa15.05■□□□□ 0
LIMK1-208ENST00000538333 LMBRD2Q68DH5 695 aaPredicted RBP15.05■□□□□ 0
LIMK1-208ENST00000538333 PRRT2Q7Z6L0 340 aaPredicted RBP15.05■□□□□ 0
LIMK1-208ENST00000538333 CD302Q8IX05 232 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms