RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 ACAD9Q9H845 621 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 ELP3Q9H9T3 547 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 ATP6V0A4Q9HBG4 840 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 LRRC4CQ9HCJ2 640 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 CYP26B1Q9NR63 512 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 NRXN2Q9P2S2 1712 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 SIPA1L1O43166 1804 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 PI4K2BG5E9Z4 385 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 EBAG9O00559 213 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 TREML2Q5T2D2 321 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 PRUNE1Q86TP1 453 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 MICALL1Q8N3F8 863 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 MDM1Q8TC05 714 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 TRAPPC12Q8WVT3 735 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 SLC7A3Q8WY07 619 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 KIFAP3Q92845 792 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 IWS1Q96ST2 819 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 FMO2Q99518 471 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 R3HDMLQ9H3Y0 253 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 ZNF302Q9NR11 478 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 FBXO40Q9UH90 709 aa9.35□□□□□ -0.91
UBE3B-208ENST00000538070 LTBP1Q14766 1721 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 DCDC2CA8MYV0 355 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 PPP1R37O75864 691 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 RGS20O76081 388 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 DDNO94850 711 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-208ENST00000538070 SFNP31947 248 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 IRX3P78415 501 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-208ENST00000538070 GTF2BQ00403 316 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 DRP2Q13474 957 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 EMC2Q15006 297 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 LY6KQ17RY6 165 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 GPD1LQ8N335 351 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 LMO3Q8TAP4 145 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 FBXO25Q8TCJ0 367 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 LRRC45Q96CN5 670 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 NLRP4Q96MN2 994 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 ISCUQ9H1K1 167 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 MLXIPLQ9NP71 852 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 DBR1Q9UK59 544 aaKnown RBP9.34□□□□□ -0.91
UBE3B-208ENST00000538070 AGO2Q9UKV8 859 aaKnown RBP9.34□□□□□ -0.91
UBE3B-208ENST00000538070 ADM5C9JUS6 153 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 NOP56O00567 594 aaKnown RBP9.34□□□□□ -0.91
UBE3B-208ENST00000538070 CFHP08603 1231 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 IFNAR2P48551 515 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 WNT7BP56706 349 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 MAGOHP61326 146 aaKnown RBP9.34□□□□□ -0.91
UBE3B-208ENST00000538070 TFAMQ00059 246 aaKnown RBP9.34□□□□□ -0.91
UBE3B-208ENST00000538070 BRDTQ58F21 947 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-208ENST00000538070 MIS18BP1Q6P0N0 1132 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 SLC39A4Q6P5W5 647 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 CCDC137Q6PK04 289 aaKnown RBP9.34□□□□□ -0.91
UBE3B-208ENST00000538070 ACTRT1Q8TDG2 376 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 WHAMMQ8TF30 809 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 SCFD2Q8WU76 684 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 CYFIP2Q96F07 1278 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 CYP39A1Q9NYL5 469 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 NXF1Q9UBU9 619 aaKnown RBP9.34□□□□□ -0.91
UBE3B-208ENST00000538070 LRRC37AA6NMS7 1700 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 H0YHG0 523 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 THAP12O43422 761 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 RTN2O75298 545 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 ACSL3O95573 720 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 HLA-DRAP01903 254 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 CHRNB2P17787 502 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 RRM1P23921 792 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 PPATQ06203 517 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 STXBP2Q15833 593 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 B3GNT9Q6UX72 402 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 GSTA5Q7RTV2 222 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 RHOT2Q8IXI1 618 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 RNF25Q96BH1 459 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-208ENST00000538070 HES6Q96HZ4 224 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 SCLT1Q96NL6 688 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 XPNPEP1Q9NQW7 623 aa9.34□□□□□ -0.91
UBE3B-208ENST00000538070 RBAKQ9NYW8 714 aaPredicted RBP9.34□□□□□ -0.91
UBE3B-208ENST00000538070 PFASO15067 1338 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 GSTTP1A0A1W2PQM5 241 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 DDX3YO15523 660 aaKnown RBP9.33□□□□□ -0.92
UBE3B-208ENST00000538070 CD19P15391 556 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 SCP2P22307 547 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 DSG3P32926 999 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 NSFP46459 744 aaKnown RBP9.33□□□□□ -0.92
UBE3B-208ENST00000538070 IRX5P78411 483 aaPredicted RBP9.33□□□□□ -0.92
UBE3B-208ENST00000538070 FMO1Q01740 532 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 PLCB3Q01970 1234 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 ITIH3Q06033 890 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 CYP24A1Q07973 514 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 UBAP2Q5T6F2 1119 aaKnown RBP9.33□□□□□ -0.92
UBE3B-208ENST00000538070 JAMLQ86YT9 394 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 ASAP3Q8TDY4 903 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 PWWP2AQ96N64 755 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 CD2APQ9Y5K6 639 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 DCAF8L1A6NGE4 600 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 FOXO6A8MYZ6 492 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 GOLGA8SH3BPF8 625 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 INO80B-WBP1J3KQ70 363 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 MYO1FO00160 1098 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 PIK3R2O00459 728 aa9.33□□□□□ -0.92
UBE3B-208ENST00000538070 GGPS1O95749 300 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms