RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 TLE6Q9H808 572 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 UBN1Q9NPG3 1134 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 KANSL3Q9P2N6 904 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 R3HDM2Q9Y2K5 976 aaKnown RBP11.39□□□□□ -0.59
RTN3-208ENST00000537981 PCDHA3Q9Y5H8 950 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 UMODL1Q5DID0 1318 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 WNK3Q9BYP7 1800 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 SRCAPQ6ZRS2 3230 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 BICDL2A1A5D9 508 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 HTR3EA5X5Y0 456 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 TP73O15350 636 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 PTGIRP43119 386 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 CLCN2P51788 898 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 OVGP1Q12889 678 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 ACAP1Q15027 740 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 CENPPQ6IPU0 288 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 MFSD5Q6N075 450 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 METTL25Q8N6Q8 603 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 TTC1Q99614 292 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 ECSITQ9BQ95 431 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 RNF26Q9BY78 433 aaPredicted RBP11.39□□□□□ -0.59
RTN3-208ENST00000537981 STX18Q9P2W9 335 aaKnown RBP11.39□□□□□ -0.59
RTN3-208ENST00000537981 CIDEBQ9UHD4 219 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 DCTN4Q9UJW0 460 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 PPM1HQ9ULR3 514 aa11.39□□□□□ -0.59
RTN3-208ENST00000537981 LMO7Q8WWI1 1683 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 FLT1P17948 1338 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 NID2Q14112 1375 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 NHSL1Q5SYE7 1610 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 DDX3YO15523 660 aaKnown RBP11.38□□□□□ -0.59
RTN3-208ENST00000537981 EYA4O95677 639 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 GSTT2P0CG29 244 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 GSTT2BP0CG30 244 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 CYP4A11Q02928 519 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 BTKQ06187 659 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 CD300CQ08708 224 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 MAPK7Q13164 816 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 AKAP4Q5JQC9 854 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 MFSD6Q6ZSS7 791 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 CCDC84Q86UT8 332 aaPredicted RBP11.38□□□□□ -0.59
RTN3-208ENST00000537981 ATP11CQ8NB49 1132 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 TTLL11Q8NHH1 800 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 WDR66Q8TBY9 1149 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 HES6Q96HZ4 224 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 CATSPER2Q96P56 530 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 FGFBP2Q9BYJ0 223 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 STK33Q9BYT3 514 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 KCNQ5Q9NR82 932 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 AIPL1Q9NZN9 384 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 SUCLA2Q9P2R7 463 aaPredicted RBP11.38□□□□□ -0.59
RTN3-208ENST00000537981 NAGPAQ9UK23 515 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 SYNPO2Q9UMS6 1093 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 TNKSO95271 1327 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 MAPK13O15264 365 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 POTEJP0CG39 1038 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 PDE6AP16499 860 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 UBA7P41226 1012 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 MTTPP55157 894 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 CTTNQ14247 550 aaKnown RBP11.38□□□□□ -0.59
RTN3-208ENST00000537981 CCDC92Q53HC0 331 aaPredicted RBP11.38□□□□□ -0.59
RTN3-208ENST00000537981 DCAF8Q5TAQ9 597 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 KLHDC10Q6PID8 442 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 SLC2A7Q6PXP3 512 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 TTC7BQ86TV6 843 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 RAVER1Q8IY67 606 aaKnown RBP11.38□□□□□ -0.59
RTN3-208ENST00000537981 PPFIBP2Q8ND30 876 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 GPKOWQ92917 476 aaPredicted RBP eCLIP11.38□□□□□ -0.593e-6■□□□□ 9.4
RTN3-208ENST00000537981 CDK5RAP3Q96JB5 506 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 NPHS2Q9NP85 383 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 GPR108Q9NPR9 543 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 FBXO6Q9NRD1 293 aaPredicted RBP11.38□□□□□ -0.59
RTN3-208ENST00000537981 CHORDC1Q9UHD1 332 aaPredicted RBP11.38□□□□□ -0.59
RTN3-208ENST00000537981 KLF15Q9UIH9 416 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 CNOT7Q9UIV1 285 aaKnown RBP11.38□□□□□ -0.59
RTN3-208ENST00000537981 ZFP69BQ9UJL9 534 aa11.38□□□□□ -0.59
RTN3-208ENST00000537981 PITPNM2Q9BZ72 1349 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 CCDC160A6NGH7 325 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 TRAFD1O14545 582 aaPredicted RBP11.37□□□□□ -0.59
RTN3-208ENST00000537981 HALP42357 657 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 DSG1Q02413 1049 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 TBL3Q12788 808 aaKnown RBP11.37□□□□□ -0.59
RTN3-208ENST00000537981 DLG1Q12959 904 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 MAP7Q14244 749 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 KYNUQ16719 465 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 GSTA3Q16772 222 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 SFT2D3Q587I9 215 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 SPDYCQ5MJ68 293 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 C6orf183Q5T699 404 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 ALKBH5Q6P6C2 394 aaKnown RBP11.37□□□□□ -0.59
RTN3-208ENST00000537981 IRF2BP2Q7Z5L9 587 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 CLNKQ7Z7G1 428 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 CPNE8Q86YQ8 564 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 RFWD2Q8NHY2 731 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 DEPTORQ8TB45 409 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 PRPF31Q8WWY3 499 aaKnown RBP11.37□□□□□ -0.59
RTN3-208ENST00000537981 FNBP1Q96RU3 617 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 SETDB2Q96T68 719 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 C12orf65Q9H3J6 166 aaKnown RBP11.37□□□□□ -0.59
RTN3-208ENST00000537981 PRKAG2Q9UGJ0 569 aa11.37□□□□□ -0.59
RTN3-208ENST00000537981 MYH11P35749 1972 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms