RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 FAM71AQ8IYT1 594 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 CTNNBL1Q8WYA6 563 aaPredicted RBP18.83■□□□□ 0.61
SNX17-210ENST00000537606 MS4A4AQ96JQ5 239 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 NT5C1BQ96P26 610 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 FNBP1Q96RU3 617 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 PCDHB18PQ96TA0 734 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 MSTO1Q9BUK6 570 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 LRRC37A2A6NM11 1700 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 PHACTR2O75167 634 aa18.83■□□□□ 0.6
SNX17-210ENST00000537606 MCCD1P59942 119 aaPredicted RBP18.83■□□□□ 0.6
SNX17-210ENST00000537606 PLCB4Q15147 1175 aa18.83■□□□□ 0.6
SNX17-210ENST00000537606 CFAP221Q4G0U5 840 aa18.83■□□□□ 0.6
SNX17-210ENST00000537606 ZBTB33Q86T24 672 aa18.83■□□□□ 0.6
SNX17-210ENST00000537606 USP37Q86T82 979 aa18.83■□□□□ 0.6
SNX17-210ENST00000537606 BBXQ8WY36 941 aaPredicted RBP18.83■□□□□ 0.6
SNX17-210ENST00000537606 KCNG1Q9UIX4 513 aa18.83■□□□□ 0.6
SNX17-210ENST00000537606 PNMA3Q9UL41 463 aa18.83■□□□□ 0.6
SNX17-210ENST00000537606 TRPC6Q9Y210 931 aa18.83■□□□□ 0.6
SNX17-210ENST00000537606 ADCY3O60266 1144 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 FTLP02792 175 aaPredicted RBP18.82■□□□□ 0.6
SNX17-210ENST00000537606 ADORA2AP29274 412 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 IFI16Q16666 785 aaKnown RBP18.82■□□□□ 0.6
SNX17-210ENST00000537606 SCARA3Q6AZY7 606 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 KCNV1Q6PIU1 500 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 RNF149Q8NC42 400 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 EPS8L1Q8TE68 723 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 CCDC102AQ96A19 550 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 PRDM4Q9UKN5 801 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 INTUQ9ULD6 942 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 STYXL1Q9Y6J8 313 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 KIF4AO95239 1232 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 MMEP08473 750 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 CHRNB2P17787 502 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 LAMTOR4Q0VGL1 99 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 SPOPLQ6IQ16 392 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 PEX26Q7Z412 305 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 FMNL3Q8IVF7 1028 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 ATP8B4Q8TF62 1192 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 BRI3BPQ8WY22 251 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 SHC3Q92529 594 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 RBAKQ9NYW8 714 aaPredicted RBP18.82■□□□□ 0.6
SNX17-210ENST00000537606 DAAM1Q9Y4D1 1078 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 CENPFP49454 3210 aa18.82■□□□□ 0.6
SNX17-210ENST00000537606 LGR5O75473 907 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 TMEM253P0C7T8 217 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 IGBP1P78318 339 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 ITIH3Q06033 890 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 BIRC3Q13489 604 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 TTLL4Q14679 1199 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.81■□□□□ 0.6
SNX17-210ENST00000537606 RHPN2Q8IUC4 686 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 TAF4BQ92750 862 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 TCHPQ9BT92 498 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 RNPEPQ9H4A4 650 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 COG5Q9UP83 839 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 ZSCAN5CA6NGD5 496 aaPredicted RBP18.81■□□□□ 0.6
SNX17-210ENST00000537606 BUB1BO60566 1050 aaPredicted RBP18.81■□□□□ 0.6
SNX17-210ENST00000537606 CLSTN1O94985 981 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 KRT5P13647 590 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 GTF2H1P32780 548 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 PSMD6Q15008 389 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 TDRD10Q5VZ19 366 aaKnown RBP18.81■□□□□ 0.6
SNX17-210ENST00000537606 METTL13Q8N6R0 699 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 RFFLQ8WZ73 363 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 FAM167AQ96KS9 214 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 SELENOOQ9BVL4 669 aa18.81■□□□□ 0.6
SNX17-210ENST00000537606 NOCTQ9UK39 431 aaKnown RBP18.81■□□□□ 0.6
SNX17-210ENST00000537606 A0A0A6YYK5 440 aaPredicted RBP18.8■□□□□ 0.6
SNX17-210ENST00000537606 A0A0B4J269 797 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 MCM3P25205 808 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 TNFSF9P41273 254 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 CCDC70Q6NSX1 233 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 CDR2LQ86X02 465 aaPredicted RBP18.8■□□□□ 0.6
SNX17-210ENST00000537606 KIAA1586Q9HCI6 787 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 VPS18Q9P253 973 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 ANKRD62A6NC57 917 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 ERICH4A6NGS2 130 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 ASB14A6NK59 587 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 CLDN3O15551 220 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 PIGRP01833 764 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 CETPP11597 493 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 ABCD1P33897 745 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 IER5Q5VY09 327 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 SLFN12LQ6IEE8 588 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 C8orf74Q6P047 294 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 C15orf39Q6ZRI6 1047 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 PLPPR4Q7Z2D5 763 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 SHCBP1Q8NEM2 672 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 MORC4Q8TE76 937 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 NLRP4Q96MN2 994 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 TMEM134Q9H6X4 195 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 FAN1Q9Y2M0 1017 aa18.8■□□□□ 0.6
SNX17-210ENST00000537606 ATMINO43313 823 aaPredicted RBP18.79■□□□□ 0.6
SNX17-210ENST00000537606 CEP104O60308 925 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 MSCO60682 206 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 HLA-DRAP01903 254 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 C4BPAP04003 597 aaKnown RBP18.79■□□□□ 0.6
SNX17-210ENST00000537606 CYP11B1P15538 503 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 CLCN3P51790 818 aa18.79■□□□□ 0.6
SNX17-210ENST00000537606 MAP9Q49MG5 647 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms