RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 GPKOWQ92917 476 aaPredicted RBP eCLIP12.46□□□□□ -0.42
POLR1B-216ENST00000537335 ADD3Q9UEY8 706 aaKnown RBP12.46□□□□□ -0.42
POLR1B-216ENST00000537335 CCDC78A2IDD5 438 aa12.46□□□□□ -0.42
POLR1B-216ENST00000537335 DDX39AO00148 427 aaKnown RBP12.46□□□□□ -0.42
POLR1B-216ENST00000537335 CLIC2O15247 247 aa12.46□□□□□ -0.42
POLR1B-216ENST00000537335 TNFRSF21O75509 655 aa12.46□□□□□ -0.42
POLR1B-216ENST00000537335 RPL5P46777 297 aaKnown RBP12.46□□□□□ -0.42
POLR1B-216ENST00000537335 SERPINH1P50454 418 aaKnown RBP12.46□□□□□ -0.42
POLR1B-216ENST00000537335 PLIN5Q00G26 463 aa12.46□□□□□ -0.42
POLR1B-216ENST00000537335 CNGA2Q16280 664 aa12.46□□□□□ -0.42
POLR1B-216ENST00000537335 KRT73Q86Y46 540 aa12.46□□□□□ -0.42
POLR1B-216ENST00000537335 CCDC60Q8IWA6 550 aaPredicted RBP12.46□□□□□ -0.42
POLR1B-216ENST00000537335 OSCARQ8IYS5 282 aa12.46□□□□□ -0.42
POLR1B-216ENST00000537335 C1orf54Q8WWF1 131 aa12.46□□□□□ -0.42
POLR1B-216ENST00000537335 CASKIN2Q8WXE0 1202 aa12.46□□□□□ -0.42
POLR1B-216ENST00000537335 AGBL1Q96MI9 1066 aa12.46□□□□□ -0.42
POLR1B-216ENST00000537335 DNAJC12Q9UKB3 198 aa12.46□□□□□ -0.42
POLR1B-216ENST00000537335 TRAPPC8Q9Y2L5 1435 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 SRRM3A6NNA2 597 aaPredicted RBP12.45□□□□□ -0.42
POLR1B-216ENST00000537335 PYGMP11217 842 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 ABCE1P61221 599 aaKnown RBP12.45□□□□□ -0.42
POLR1B-216ENST00000537335 FOXD4Q12950 439 aaPredicted RBP12.45□□□□□ -0.42
POLR1B-216ENST00000537335 PRUNE1Q86TP1 453 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 ZNF589Q86UQ0 364 aaPredicted RBP12.45□□□□□ -0.42
POLR1B-216ENST00000537335 MAGED4Q96JG8 741 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 ATP6V1HQ9UI12 483 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 PCDHGA3Q9Y5H0 932 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 CCDC189A1A4V9 331 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 IRS4O14654 1257 aaPredicted RBP12.45□□□□□ -0.42
POLR1B-216ENST00000537335 SRP72O76094 671 aaKnown RBP12.45□□□□□ -0.42
POLR1B-216ENST00000537335 IFNA8P32881 189 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 TTKP33981 857 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 PIK3CAP42336 1068 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 LIG4P49917 911 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 MXI1P50539 228 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 ANO4Q32M45 955 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 LMBRD2Q68DH5 695 aaPredicted RBP12.45□□□□□ -0.42
POLR1B-216ENST00000537335 TMEM110Q86TL2 294 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 TAGAPQ8N103 731 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 AGR3Q8TD06 166 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 PRCCQ92733 491 aaPredicted RBP12.45□□□□□ -0.42
POLR1B-216ENST00000537335 GRIP2Q9C0E4 1043 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 PDZK1P1A8MUH7 402 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 PAX3P23760 479 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 YARSP54577 528 aaKnown RBP12.45□□□□□ -0.42
POLR1B-216ENST00000537335 AASDHQ4L235 1098 aaPredicted RBP12.45□□□□□ -0.42
POLR1B-216ENST00000537335 ERICH1Q86X53 443 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 RYBPQ8N488 228 aaPredicted RBP12.45□□□□□ -0.42
POLR1B-216ENST00000537335 LPIN2Q92539 896 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 REXO4Q9GZR2 422 aaKnown RBP12.45□□□□□ -0.42
POLR1B-216ENST00000537335 SELENONQ9NZV5 590 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 MYRFQ9Y2G1 1151 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 H0YCG3 227 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 ARL4AP40617 200 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 TFDP2Q14188 446 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 PTK2BQ14289 1009 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 CYFIP1Q7L576 1253 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 C19orf60Q96EN9 201 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 CEP95Q96GE4 821 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 ZCWPW1Q9H0M4 648 aa12.45□□□□□ -0.42
POLR1B-216ENST00000537335 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 EPRSP07814 1512 aaKnown RBP12.44□□□□□ -0.42
POLR1B-216ENST00000537335 FESP07332 822 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 CCDC166P0CW27 439 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 CASP1P29466 404 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 USP4Q13107 963 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 ARID3BQ8IVW6 561 aaPredicted RBP12.44□□□□□ -0.42
POLR1B-216ENST00000537335 VPS50Q96JG6 964 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 TMEM79Q9BSE2 394 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 FAM8A1Q9UBU6 413 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 PCDHA4Q9UN74 947 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 MROH7Q68CQ1 1323 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 A0A087WXM4 84 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 KLHL33A6NCF5 533 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 NR1D2Q14995 579 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 MSL3Q8N5Y2 521 aaKnown RBP12.44□□□□□ -0.42
POLR1B-216ENST00000537335 ZNF564Q8TBZ8 553 aaPredicted RBP12.44□□□□□ -0.42
POLR1B-216ENST00000537335 GDPD5Q8WTR4 605 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 E2F7Q96AV8 911 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 MXD3Q9BW11 206 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 GCOM2Q9BZD3 368 aaPredicted RBP12.44□□□□□ -0.42
POLR1B-216ENST00000537335 CFAP43Q8NDM7 1665 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 PNMA8CA0A1B0GUJ8 204 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 CYTH3O43739 400 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 TBC1D12O60347 775 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 KLHL41O60662 606 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 SARSP49591 514 aaKnown RBP12.44□□□□□ -0.42
POLR1B-216ENST00000537335 TOB2Q14106 344 aaPredicted RBP12.44□□□□□ -0.42
POLR1B-216ENST00000537335 TTC27Q6P3X3 843 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 ZNF804AQ7Z570 1209 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 MTDHQ86UE4 582 aaKnown RBP12.44□□□□□ -0.42
POLR1B-216ENST00000537335 AIFM3Q96NN9 605 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 DMGDHQ9UI17 866 aaKnown RBP12.44□□□□□ -0.42
POLR1B-216ENST00000537335 MAGED2Q9UNF1 606 aaPredicted RBP12.44□□□□□ -0.42
POLR1B-216ENST00000537335 NOS1P29475 1434 aa12.44□□□□□ -0.42
POLR1B-216ENST00000537335 PHGDHO43175 533 aaKnown RBP12.43□□□□□ -0.42
POLR1B-216ENST00000537335 TRAF2Q12933 501 aa12.43□□□□□ -0.42
POLR1B-216ENST00000537335 PABPC4Q13310 644 aaKnown RBP eCLIP12.43□□□□□ -0.421e-6■□□□□ 9.5
POLR1B-216ENST00000537335 SLC18A3Q16572 532 aa12.43□□□□□ -0.42
POLR1B-216ENST00000537335 FAM47AQ5JRC9 791 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms