RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 UPF2Q9HAU5 1272 aaKnown RBP14.48□□□□□ -0.09
RTN3-207ENST00000536011 RXFP1Q9HBX9 757 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 TADA2AO75478 443 aa14.47□□□□□ -0.09
RTN3-207ENST00000536011 EFEMP2O95967 443 aa14.47□□□□□ -0.09
RTN3-207ENST00000536011 NUBP1P53384 320 aa14.47□□□□□ -0.09
RTN3-207ENST00000536011 ELAVL2Q12926 359 aaKnown RBP14.47□□□□□ -0.09
RTN3-207ENST00000536011 TUSC3Q13454 348 aa14.47□□□□□ -0.09
RTN3-207ENST00000536011 HSP90AA2PQ14568 343 aaPredicted RBP14.47□□□□□ -0.09
RTN3-207ENST00000536011 KRT79Q5XKE5 535 aa14.47□□□□□ -0.09
RTN3-207ENST00000536011 IGSF22Q8N9C0 903 aa14.47□□□□□ -0.09
RTN3-207ENST00000536011 CCDC113Q9H0I3 377 aa14.47□□□□□ -0.09
RTN3-207ENST00000536011 PLEKHA4Q9H4M7 779 aa14.47□□□□□ -0.09
RTN3-207ENST00000536011 CHST7Q9NS84 486 aa14.47□□□□□ -0.09
RTN3-207ENST00000536011 DDX19AQ9NUU7 478 aaKnown RBP14.47□□□□□ -0.09
RTN3-207ENST00000536011 MIOSQ9NXC5 875 aa14.47□□□□□ -0.09
RTN3-207ENST00000536011 KLK14Q9P0G3 267 aa14.47□□□□□ -0.09
RTN3-207ENST00000536011 FNIP2Q9P278 1114 aa14.47□□□□□ -0.09
RTN3-207ENST00000536011 KIAA1024Q9UPX6 916 aa14.47□□□□□ -0.09
RTN3-207ENST00000536011 DNM3Q9UQ16 869 aa14.47□□□□□ -0.09
RTN3-207ENST00000536011 DENND4AQ7Z401 1863 aa14.46□□□□□ -0.09
RTN3-207ENST00000536011 RECQL4O94761 1208 aa14.46□□□□□ -0.09
RTN3-207ENST00000536011 THP07101 528 aa14.46□□□□□ -0.09
RTN3-207ENST00000536011 LIG1P18858 919 aa14.46□□□□□ -0.09
RTN3-207ENST00000536011 PRPHP41219 470 aa14.46□□□□□ -0.09
RTN3-207ENST00000536011 PTGDRQ13258 359 aa14.46□□□□□ -0.09
RTN3-207ENST00000536011 C8orf34Q49A92 452 aa14.46□□□□□ -0.09
RTN3-207ENST00000536011 PDXDC1Q6P996 788 aa14.46□□□□□ -0.09
RTN3-207ENST00000536011 DTHD1Q6ZMT9 781 aa14.46□□□□□ -0.09
RTN3-207ENST00000536011 GSTCDQ8NEC7 633 aa14.46□□□□□ -0.09
RTN3-207ENST00000536011 BSNDQ8WZ55 320 aa14.46□□□□□ -0.09
RTN3-207ENST00000536011 DRC1Q96MC2 740 aa14.46□□□□□ -0.09
RTN3-207ENST00000536011 KIF2CQ99661 725 aa14.46□□□□□ -0.09
RTN3-207ENST00000536011 LIMD1Q9UGP4 676 aa14.46□□□□□ -0.09
RTN3-207ENST00000536011 CCDC195A0A1B0GUA6 201 aa14.45□□□□□ -0.1
RTN3-207ENST00000536011 BRD1O95696 1058 aa14.45□□□□□ -0.1
RTN3-207ENST00000536011 DMP1Q13316 513 aaPredicted RBP14.45□□□□□ -0.1
RTN3-207ENST00000536011 RILPL1Q5EBL4 403 aa14.45□□□□□ -0.1
RTN3-207ENST00000536011 ATF7IP2Q5U623 682 aa14.45□□□□□ -0.1
RTN3-207ENST00000536011 KANK3Q6NY19 840 aa14.45□□□□□ -0.1
RTN3-207ENST00000536011 TAS1R1Q7RTX1 841 aa14.45□□□□□ -0.1
RTN3-207ENST00000536011 KCTD17Q8N5Z5 321 aa14.45□□□□□ -0.1
RTN3-207ENST00000536011 C4orf32Q8N8J7 132 aa14.45□□□□□ -0.1
RTN3-207ENST00000536011 RIN2Q8WYP3 895 aaPredicted RBP14.45□□□□□ -0.1
RTN3-207ENST00000536011 TIPINQ9BVW5 301 aa14.45□□□□□ -0.1
RTN3-207ENST00000536011 GPR62Q9BZJ7 368 aa14.45□□□□□ -0.1
RTN3-207ENST00000536011 MFSD1Q9H3U5 465 aa14.45□□□□□ -0.1
RTN3-207ENST00000536011 ZDHHC7Q9NXF8 308 aa14.45□□□□□ -0.1
RTN3-207ENST00000536011 SNTG2Q9NY99 539 aa14.45□□□□□ -0.1
RTN3-207ENST00000536011 KCNG1Q9UIX4 513 aa14.45□□□□□ -0.1
RTN3-207ENST00000536011 F8W810 466 aa14.44□□□□□ -0.1
RTN3-207ENST00000536011 H3BQV1 296 aa14.44□□□□□ -0.1
RTN3-207ENST00000536011 K7ERI5 159 aa14.44□□□□□ -0.1
RTN3-207ENST00000536011 ASGR2P07307 311 aa14.44□□□□□ -0.1
RTN3-207ENST00000536011 NBR1Q14596 966 aa14.44□□□□□ -0.1
RTN3-207ENST00000536011 MCTP1Q6DN14 999 aa14.44□□□□□ -0.1
RTN3-207ENST00000536011 ALYREFQ86V81 257 aaKnown RBP14.44□□□□□ -0.1
RTN3-207ENST00000536011 SMG7Q92540 1137 aaKnown RBP14.44□□□□□ -0.1
RTN3-207ENST00000536011 TTPALQ9BTX7 342 aa14.44□□□□□ -0.1
RTN3-207ENST00000536011 C17orf75Q9HAS0 396 aa14.44□□□□□ -0.1
RTN3-207ENST00000536011 PIDD1Q9HB75 910 aa14.44□□□□□ -0.1
RTN3-207ENST00000536011 WDR6Q9NNW5 1121 aaKnown RBP14.44□□□□□ -0.1
RTN3-207ENST00000536011 TOPORSQ9NS56 1045 aaPredicted RBP14.44□□□□□ -0.1
RTN3-207ENST00000536011 IGSF9Q9P2J2 1179 aa14.44□□□□□ -0.1
RTN3-207ENST00000536011 RBM19Q9Y4C8 960 aaKnown RBP14.44□□□□□ -0.1
RTN3-207ENST00000536011 PCDHB6Q9Y5E3 794 aa14.44□□□□□ -0.1
RTN3-207ENST00000536011 CLUHO75153 1309 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 CASTOR2A6NHX0 329 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 CCDC169A6NNP5 214 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 PTGESO14684 152 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 TGM5O43548 720 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 KIF4AO95239 1232 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 AVPR2P30518 371 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 MCM2P49736 904 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 MRE11P49959 708 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 TOB1P50616 345 aaPredicted RBP14.43□□□□□ -0.1
RTN3-207ENST00000536011 YARSP54577 528 aaKnown RBP14.43□□□□□ -0.1
RTN3-207ENST00000536011 TDGQ13569 410 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 ECM1Q16610 540 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 LIN9Q5TKA1 542 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 PALB2Q86YC2 1186 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 PRSS33Q8NF86 280 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 PIK3R5Q8WYR1 880 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 B3GALT6Q96L58 329 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 UROC1Q96N76 676 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 KIFC3Q9BVG8 833 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 CCDC94Q9BW85 323 aaPredicted RBP14.43□□□□□ -0.1
RTN3-207ENST00000536011 MRPL4Q9BYD3 311 aaKnown RBP14.43□□□□□ -0.1
RTN3-207ENST00000536011 TNFSF13BQ9Y275 285 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 GDAQ9Y2T3 454 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 KMT2EQ8IZD2 1858 aa14.43□□□□□ -0.1
RTN3-207ENST00000536011 PLXNA3P51805 1871 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 TTLL13PA6NNM8 815 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 TRAPPC3O43617 180 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 PAPLNO95428 1278 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 PRR29P0C7W0 189 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 GBP2P32456 591 aaPredicted RBP14.42□□□□□ -0.1
RTN3-207ENST00000536011 NPTX2P47972 431 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 PEX3P56589 373 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 ZNF568Q3ZCX4 644 aa14.42□□□□□ -0.1
RTN3-207ENST00000536011 IER5LQ5T953 404 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms