RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 ZDBF2Q9HCK1 2354 aa17.83■□□□□ 0.45
CLSTN3-204ENST00000535313 ZNF318Q5VUA4 2279 aa17.83■□□□□ 0.45
CLSTN3-204ENST00000535313 SF3B1O75533 1304 aaKnown RBP eCLIP17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 CCDC169A6NNP5 214 aa17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 K7ERI5 159 aa17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 RECQL4O94761 1208 aa17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 THP07101 528 aa17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 MCM2P49736 904 aa17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 HSP90AA2PQ14568 343 aaPredicted RBP17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 C15orf39Q6ZRI6 1047 aa17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 CCDC149Q6ZUS6 474 aa17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 GPR65Q8IYL9 337 aa17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 UBALD2Q8IYN6 164 aa17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 ZDHHC14Q8IZN3 488 aa17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 RABGGTAQ92696 567 aa17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 ACSF2Q96CM8 615 aaPredicted RBP17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 GPR62Q9BZJ7 368 aa17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 SORCS3Q9UPU3 1222 aa17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 PIEZO1Q92508 2521 aa17.83■□□□□ 0.44
CLSTN3-204ENST00000535313 CASTOR2A6NHX0 329 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 PP2D1A8MPX8 630 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 E9PMD0 336 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 GJB2P29033 226 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 CREMQ03060 361 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 DMP1Q13316 513 aaPredicted RBP17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 ZRSR1Q15695 479 aaKnown RBP17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 IL17AQ16552 155 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 ATF7IP2Q5U623 682 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 EEF1DP3Q658K8 133 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 OTOP3Q7RTS5 596 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 FBXL6Q8N531 539 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 CMASQ8NFW8 434 aaPredicted RBP17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 RIN2Q8WYP3 895 aaPredicted RBP17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 ASIC4Q96FT7 647 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 B3GALT6Q96L58 329 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 DRC1Q96MC2 740 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 LIMD1Q9UGP4 676 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 GDAQ9Y2T3 454 aa17.82■□□□□ 0.44
CLSTN3-204ENST00000535313 PHLPP2Q6ZVD8 1323 aa17.81■□□□□ 0.44
CLSTN3-204ENST00000535313 HIP1RO75146 1068 aa17.81■□□□□ 0.44
CLSTN3-204ENST00000535313 C1RP00736 705 aa17.81■□□□□ 0.44
CLSTN3-204ENST00000535313 EDN1P05305 212 aa17.81■□□□□ 0.44
CLSTN3-204ENST00000535313 CDC25AP30304 524 aa17.81■□□□□ 0.44
CLSTN3-204ENST00000535313 HOXD11P31277 338 aaPredicted RBP17.81■□□□□ 0.44
CLSTN3-204ENST00000535313 PEX3P56589 373 aa17.81■□□□□ 0.44
CLSTN3-204ENST00000535313 NT5DC1Q5TFE4 455 aa17.81■□□□□ 0.44
CLSTN3-204ENST00000535313 CYP26C1Q6V0L0 522 aa17.81■□□□□ 0.44
CLSTN3-204ENST00000535313 PALB2Q86YC2 1186 aa17.81■□□□□ 0.44
CLSTN3-204ENST00000535313 FNIP2Q9P278 1114 aa17.81■□□□□ 0.44
CLSTN3-204ENST00000535313 CACNG4Q9UBN1 327 aa17.81■□□□□ 0.44
CLSTN3-204ENST00000535313 CCDC195A0A1B0GUA6 201 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 PTGESO14684 152 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 NPTX2P47972 431 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 ATP2C1P98194 919 aaPredicted RBP17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 RINT1Q6NUQ1 792 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 FEZF2Q8TBJ5 459 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 HASPINQ8TF76 798 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 HDAC7Q8WUI4 952 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 PRRX2Q99811 253 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 PAAF1Q9BRP4 392 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 MMTAG2Q9BU76 263 aaKnown RBP17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 TIPINQ9BVW5 301 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 PLEKHA4Q9H4M7 779 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 TMEM134Q9H6X4 195 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 SMC3Q9UQE7 1217 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 TNFSF13BQ9Y275 285 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 WDFY4Q6ZS81 3184 aa17.8■□□□□ 0.44
CLSTN3-204ENST00000535313 MYO10Q9HD67 2058 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 KIF4AO95239 1232 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 CD2BP2O95400 341 aaKnown RBP17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 BRD1O95696 1058 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 ASGR2P07307 311 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 SPATA31D3P0C874 917 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 MYBP10242 640 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 ELAVL2Q12926 359 aaKnown RBP17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 FAM171A1Q5VUB5 890 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 SPATA31D4Q6ZUB0 917 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 C1orf186Q6ZWK4 172 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 GLYCTKQ8IVS8 523 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 STAMQ92783 540 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 TTPALQ9BTX7 342 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 RUSC1Q9BVN2 902 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 MRPL4Q9BYD3 311 aaKnown RBP17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 RHOBTB2Q9BYZ6 727 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 NT5C3AQ9H0P0 336 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 C17orf75Q9HAS0 396 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 KMT5AQ9NQR1 393 aa17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 RBM19Q9Y4C8 960 aaKnown RBP17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.79■□□□□ 0.44
CLSTN3-204ENST00000535313 VWA3AA6NCI4 1184 aa17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 TGM5O43548 720 aa17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 RPL17P18621 184 aaKnown RBP17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 YARSP54577 528 aaKnown RBP17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 NHLH1Q02575 133 aa17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 RTP2Q5QGT7 225 aa17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 ARL6IP4Q66PJ3 421 aaKnown RBP17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 KCNK18Q7Z418 384 aa17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 CEP57Q86XR8 500 aa17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 DAW1Q8N136 415 aa17.78■□□□□ 0.44
CLSTN3-204ENST00000535313 KCTD17Q8N5Z5 321 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms