RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 CCHCR1Q8TD31 782 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 SLCO1B3Q9NPD5 702 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 TOPORSQ9NS56 1045 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-232ENST00000535094 GRHL1Q9NZI5 618 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 TIAM2Q8IVF5 1701 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 NUDT17P0C025 328 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 PLS3P13797 630 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 NSFP46459 744 aaKnown RBP16.97■□□□□ 0.31
MCF2L-232ENST00000535094 PPP3CAQ08209 521 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 ZNF720Q7Z2F6 126 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 SNF8Q96H20 258 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 TEKT3Q9BXF9 490 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 IKBKGQ9Y6K9 419 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 C5orf60A6NFR6 353 aa16.96■□□□□ 0.31
MCF2L-232ENST00000535094 TCP10L2B9ZVM9 353 aa16.96■□□□□ 0.31
MCF2L-232ENST00000535094 TM4SF1P30408 202 aa16.96■□□□□ 0.31
MCF2L-232ENST00000535094 RASA3Q14644 834 aa16.96■□□□□ 0.31
MCF2L-232ENST00000535094 DPH6Q7L8W6 267 aa16.96■□□□□ 0.31
MCF2L-232ENST00000535094 AMIGO3Q86WK7 504 aa16.96■□□□□ 0.31
MCF2L-232ENST00000535094 FITM2Q8N6M3 262 aa16.96■□□□□ 0.31
MCF2L-232ENST00000535094 RBM15Q96T37 977 aaKnown RBP eCLIP16.96■□□□□ 0.318e-6■■■■■ 30.1
MCF2L-232ENST00000535094 PAGR1Q9BTK6 254 aa16.96■□□□□ 0.31
MCF2L-232ENST00000535094 TMOD2Q9NZR1 351 aa16.96■□□□□ 0.31
MCF2L-232ENST00000535094 HOXA7P31268 230 aaPredicted RBP16.96■□□□□ 0.31
MCF2L-232ENST00000535094 NOP9Q86U38 636 aaKnown RBP16.96■□□□□ 0.31
MCF2L-232ENST00000535094 ZSWIM2Q8NEG5 633 aa16.96■□□□□ 0.31
MCF2L-232ENST00000535094 FNBP1Q96RU3 617 aa16.96■□□□□ 0.31
MCF2L-232ENST00000535094 TXLNGQ9NUQ3 528 aa16.96■□□□□ 0.31
MCF2L-232ENST00000535094 NAALADL1Q9UQQ1 740 aa16.96■□□□□ 0.31
MCF2L-232ENST00000535094 CLRN2A0PK11 232 aa16.96■□□□□ 0.3
MCF2L-232ENST00000535094 ATP2A1O14983 1001 aa16.96■□□□□ 0.3
MCF2L-232ENST00000535094 CBX6O95503 412 aa16.96■□□□□ 0.3
MCF2L-232ENST00000535094 CCND1P24385 295 aa16.96■□□□□ 0.3
MCF2L-232ENST00000535094 TSNAXIP1Q2TAA8 658 aa16.96■□□□□ 0.3
MCF2L-232ENST00000535094 ARMC2Q8NEN0 867 aa16.96■□□□□ 0.3
MCF2L-232ENST00000535094 STMN2Q93045 179 aa16.96■□□□□ 0.3
MCF2L-232ENST00000535094 TDRD3Q9H7E2 651 aaKnown RBP16.96■□□□□ 0.3
MCF2L-232ENST00000535094 EHMT1Q9H9B1 1298 aa16.96■□□□□ 0.3
MCF2L-232ENST00000535094 NPHS2Q9NP85 383 aa16.96■□□□□ 0.3
MCF2L-232ENST00000535094 MYH1P12882 1939 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 MYH4Q9Y623 1939 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 SPATA31A1Q5TZJ5 1347 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 SRRM3A6NNA2 597 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-232ENST00000535094 SLITRK3O94933 977 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 RALAP11233 206 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 PRELPP51888 382 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 JAM2P57087 298 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 BIRC2Q13490 618 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 EAPPQ56P03 285 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-232ENST00000535094 FYB2Q5VWT5 728 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 USP20Q9Y2K6 914 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 SLIT2O94813 1529 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 CFAP69A5D8W1 941 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 ARP10275 920 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 NT5C2P49902 561 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 ANKRD20A2Q5SQ80 823 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 ANKRD20A1Q5TYW2 823 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 ANKRD20A3Q5VUR7 823 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 PPP1R21Q6ZMI0 780 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 CBWD2Q8IUF1 395 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 ACCSQ96QU6 501 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.95■□□□□ 0.34e-7■■■■□ 22.3
MCF2L-232ENST00000535094 HSPBP1Q9NZL4 362 aa16.95■□□□□ 0.3
MCF2L-232ENST00000535094 ZNF142P52746 1687 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-232ENST00000535094 DDTLA6NHG4 134 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-232ENST00000535094 IPO5O00410 1097 aaKnown RBP16.94■□□□□ 0.3
MCF2L-232ENST00000535094 GSTA1P08263 222 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 PAEPP09466 180 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 POLE2P56282 527 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 PPATQ06203 517 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 RRP1BQ14684 758 aaKnown RBP16.94■□□□□ 0.3
MCF2L-232ENST00000535094 TMEM132AQ24JP5 1023 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 P3H1Q32P28 736 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 WLSQ5T9L3 541 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 DCUN1D2Q6PH85 259 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 TRMT10CQ7L0Y3 403 aaKnown RBP16.94■□□□□ 0.3
MCF2L-232ENST00000535094 APBB1IPQ7Z5R6 666 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-232ENST00000535094 ETNPPLQ8TBG4 499 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 GRK7Q8WTQ7 553 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 PCDHB18PQ96TA0 734 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 SGK1O00141 431 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 MAPK13O15264 365 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 GJB6O95452 261 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 ANXA13P27216 316 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 ZNF394Q53GI3 561 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 BZW1Q7L1Q6 419 aaKnown RBP16.94■□□□□ 0.3
MCF2L-232ENST00000535094 CENPTQ96BT3 561 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 CSRNP1Q96S65 589 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 METTL5Q9NRN9 209 aaKnown RBP16.94■□□□□ 0.3
MCF2L-232ENST00000535094 PI4KBQ9UBF8 816 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 SNED1Q8TER0 1413 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 HNRNPDLO14979 420 aaKnown RBP16.94■□□□□ 0.3
MCF2L-232ENST00000535094 CRKP46108 304 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 WDR44Q5JSH3 913 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 ZBED8Q8IZ13 594 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 KCNQ5Q9NR82 932 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 AGTPBP1Q9UPW5 1226 aa16.94■□□□□ 0.3
MCF2L-232ENST00000535094 LRRD1A4D1F6 860 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 TTC4O95801 387 aa16.93■□□□□ 0.3
MCF2L-232ENST00000535094 KRT10P13645 584 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms