RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CXCL10P02778 98 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 NR3C1P04150 777 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 RFC2P35250 354 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 MCL1Q07820 350 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 PAK2Q13177 524 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 MPZL3Q6UWV2 235 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 LRRC55Q6ZSA7 311 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 NOC3LQ8WTT2 800 aaKnown RBP13.39□□□□□ -0.27
SCARB1-204ENST00000535005 TRIM43Q96BQ3 446 aaPredicted RBP13.39□□□□□ -0.27
SCARB1-204ENST00000535005 CEP63Q96MT8 703 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 UBXN6Q9BZV1 441 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 PDZD7Q9H5P4 517 aa13.39□□□□□ -0.27
SCARB1-204ENST00000535005 CLIC2O15247 247 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 CLDN3O15551 220 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 FGFR1OPO95684 399 aaKnown RBP13.38□□□□□ -0.27
SCARB1-204ENST00000535005 MCF2P10911 925 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 CD52P31358 61 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 CYP2C18P33260 490 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 DSC3Q14574 896 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 ARID5BQ14865 1188 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 PLEKHG4Q58EX7 1191 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 EEF1DP3Q658K8 133 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 ARMCX5Q6P1M9 558 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 NOTUMQ6P988 496 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 CSGALNACT2Q8N6G5 542 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 ZBTB45Q96K62 511 aaPredicted RBP13.38□□□□□ -0.27
SCARB1-204ENST00000535005 CBWD1Q9BRT8 395 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 TRAIPQ9BWF2 469 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 PPP1R12CQ9BZL4 782 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 HAPLN2Q9GZV7 340 aa13.38□□□□□ -0.27
SCARB1-204ENST00000535005 TRMT1Q9NXH9 659 aaKnown RBP13.38□□□□□ -0.27
SCARB1-204ENST00000535005 CETN3O15182 167 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 ZSCAN12O43309 604 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 NR2F2P24468 414 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 CCL23P55773 120 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 TUBB4BP68371 445 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 NFX1Q12986 1120 aaKnown RBP13.37□□□□□ -0.27
SCARB1-204ENST00000535005 ADAM9Q13443 819 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 TMEM132AQ24JP5 1023 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 ARHGAP29Q52LW3 1261 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 SLC27A1Q6PCB7 646 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 APBB1IPQ7Z5R6 666 aaPredicted RBP13.37□□□□□ -0.27
SCARB1-204ENST00000535005 XXYLT1Q8NBI6 393 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 MNS1Q8NEH6 495 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 POMGNT1Q8WZA1 660 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 CPB2Q96IY4 423 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 FBXL18Q96ME1 805 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 TCHPQ9BT92 498 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 CDT1Q9H211 546 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 TMX1Q9H3N1 280 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 THAP9Q9H5L6 903 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 KIAA1586Q9HCI6 787 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 PSD3Q9NYI0 1048 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 HSPBP1Q9NZL4 362 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 PIN4Q9Y237 131 aaKnown RBP13.37□□□□□ -0.27
SCARB1-204ENST00000535005 NFE2L3Q9Y4A8 694 aa13.37□□□□□ -0.27
SCARB1-204ENST00000535005 TADA3O75528 432 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 LDHAP00338 332 aaKnown RBP13.36□□□□□ -0.27
SCARB1-204ENST00000535005 RAG1P15918 1043 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 POU5F1Q01860 360 aaKnown RBP13.36□□□□□ -0.27
SCARB1-204ENST00000535005 ERCC6LQ2NKX8 1250 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 DCAF4L1Q3SXM0 396 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 UBXN11Q5T124 520 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 MFSD5Q6N075 450 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 SYT10Q6XYQ8 523 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 IPO4Q8TEX9 1081 aaKnown RBP13.36□□□□□ -0.27
SCARB1-204ENST00000535005 SEPT8Q92599 483 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 APBB2Q92870 758 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 SCLYQ96I15 445 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 ADPGKQ9BRR6 497 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 MKNK1Q9BUB5 465 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 FTHL17Q9BXU8 183 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 IFIH1Q9BYX4 1025 aaKnown RBP13.36□□□□□ -0.27
SCARB1-204ENST00000535005 CWC15Q9P013 229 aaKnown RBP13.36□□□□□ -0.27
SCARB1-204ENST00000535005 AGO2Q9UKV8 859 aaKnown RBP13.36□□□□□ -0.27
SCARB1-204ENST00000535005 ALPK3Q96L96 1907 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 TANC1Q9C0D5 1861 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 MAPK13O15264 365 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 OGTO15294 1046 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 EXTL3O43909 919 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 FAM189A1O60320 539 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 ITGB8P26012 769 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 PLA2G4AP47712 749 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 MCCD1P59942 119 aaPredicted RBP13.36□□□□□ -0.27
SCARB1-204ENST00000535005 KYAT1Q16773 422 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 ZNF568Q3ZCX4 644 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 CDKAL1Q5VV42 579 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 IRF2BP1Q8IU81 584 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 MSTO1Q9BUK6 570 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 HSD3B7Q9H2F3 369 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 PRDM5Q9NQX1 630 aaPredicted RBP13.36□□□□□ -0.27
SCARB1-204ENST00000535005 FANCLQ9NW38 375 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 ANKFY1Q9P2R3 1169 aa13.36□□□□□ -0.27
SCARB1-204ENST00000535005 SLC16A3O15427 465 aaKnown RBP13.35□□□□□ -0.27
SCARB1-204ENST00000535005 EXOC3O60645 756 aa13.35□□□□□ -0.27
SCARB1-204ENST00000535005 GNA14O95837 355 aa13.35□□□□□ -0.27
SCARB1-204ENST00000535005 ZNF18P17022 549 aa13.35□□□□□ -0.27
SCARB1-204ENST00000535005 CYP2J2P51589 502 aa13.35□□□□□ -0.27
SCARB1-204ENST00000535005 MARSP56192 900 aaKnown RBP13.35□□□□□ -0.27
SCARB1-204ENST00000535005 TMC6Q7Z403 805 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms