RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 PDXDC1Q6P996 788 aa22.06■■□□□ 1.12
TNFRSF1A-205ENST00000534885 CYP26C1Q6V0L0 522 aa22.06■■□□□ 1.12
TNFRSF1A-205ENST00000534885 TOGARAM2Q6ZUX3 1019 aa22.06■■□□□ 1.12
TNFRSF1A-205ENST00000534885 INTS2Q9H0H0 1204 aaKnown RBP22.06■■□□□ 1.12
TNFRSF1A-205ENST00000534885 CDT1Q9H211 546 aa22.06■■□□□ 1.12
TNFRSF1A-205ENST00000534885 AJAP1Q9UKB5 411 aaPredicted RBP22.06■■□□□ 1.12
TNFRSF1A-205ENST00000534885 PLAGL2Q9UPG8 496 aa22.06■■□□□ 1.12
TNFRSF1A-205ENST00000534885 TSPAN1O60635 241 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 N4BP1O75113 896 aaKnown RBP22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 HSPA6P17066 643 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 EPC2Q52LR7 807 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 USP37Q86T82 979 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 TMTC1Q8IUR5 882 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 CEP120Q8N960 986 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 HMX1Q9NP08 348 aaPredicted RBP22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 TRMT1Q9NXH9 659 aaKnown RBP22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 FRMPD3Q5JV73 1810 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 GRIN2DO15399 1336 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 PTPRJQ12913 1337 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 P4HA2O15460 535 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 ERLIN2O94905 339 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 CDC42EP1Q00587 391 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 RNF180Q86T96 592 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 THNSL1Q8IYQ7 743 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 PCSK9Q8NBP7 692 aaKnown RBP22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 SH3TC2Q8TF17 1288 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 ZNF516Q92618 1163 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 GCOM2Q9BZD3 368 aaPredicted RBP22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 PDZD7Q9H5P4 517 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 TMEM8AQ9HCN3 771 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 SPTLC3Q9NUV7 552 aa22.05■■□□□ 1.12
TNFRSF1A-205ENST00000534885 HNRNPH3P31942 346 aaKnown RBP22.04■■□□□ 1.12
TNFRSF1A-205ENST00000534885 CLDN10P78369 228 aa22.04■■□□□ 1.12
TNFRSF1A-205ENST00000534885 ENPEPQ07075 957 aa22.04■■□□□ 1.12
TNFRSF1A-205ENST00000534885 LHX8Q68G74 356 aa22.04■■□□□ 1.12
TNFRSF1A-205ENST00000534885 KRT39Q6A163 491 aa22.04■■□□□ 1.12
TNFRSF1A-205ENST00000534885 TMEM40Q8WWA1 233 aa22.04■■□□□ 1.12
TNFRSF1A-205ENST00000534885 FNBP1Q96RU3 617 aa22.04■■□□□ 1.12
TNFRSF1A-205ENST00000534885 DESI2Q9BSY9 194 aa22.04■■□□□ 1.12
TNFRSF1A-205ENST00000534885 PMM2O15305 246 aa22.03■■□□□ 1.12
TNFRSF1A-205ENST00000534885 OSTNP61366 133 aa22.03■■□□□ 1.12
TNFRSF1A-205ENST00000534885 SV2AQ7L0J3 742 aa22.03■■□□□ 1.12
TNFRSF1A-205ENST00000534885 BRSK2Q8IWQ3 736 aa22.03■■□□□ 1.12
TNFRSF1A-205ENST00000534885 CCAR2Q8N163 923 aaKnown RBP22.03■■□□□ 1.12
TNFRSF1A-205ENST00000534885 EHBP1Q8NDI1 1231 aa22.03■■□□□ 1.12
TNFRSF1A-205ENST00000534885 ZNHIT6Q9NWK9 470 aaKnown RBP22.03■■□□□ 1.12
TNFRSF1A-205ENST00000534885 CPSF3Q9UKF6 684 aaKnown RBP22.03■■□□□ 1.12
TNFRSF1A-205ENST00000534885 DARSP14868 501 aaKnown RBP22.03■■□□□ 1.12
TNFRSF1A-205ENST00000534885 TNNI1P19237 187 aa22.03■■□□□ 1.12
TNFRSF1A-205ENST00000534885 GTF2H1P32780 548 aa22.03■■□□□ 1.12
TNFRSF1A-205ENST00000534885 CETN1Q12798 172 aa22.03■■□□□ 1.12
TNFRSF1A-205ENST00000534885 IQCEQ6IPM2 695 aa22.03■■□□□ 1.12
TNFRSF1A-205ENST00000534885 FBXL5Q9UKA1 691 aa22.03■■□□□ 1.12
TNFRSF1A-205ENST00000534885 HSP90AA2PQ14568 343 aaPredicted RBP22.02■■□□□ 1.12
TNFRSF1A-205ENST00000534885 PHLDB3Q6NSJ2 640 aa22.02■■□□□ 1.12
TNFRSF1A-205ENST00000534885 TAF2Q6P1X5 1199 aa22.02■■□□□ 1.12
TNFRSF1A-205ENST00000534885 TMEM192Q8IY95 271 aa22.02■■□□□ 1.12
TNFRSF1A-205ENST00000534885 TAS1R2Q8TE23 839 aa22.02■■□□□ 1.12
TNFRSF1A-205ENST00000534885 SEMA4DQ92854 862 aa22.02■■□□□ 1.12
TNFRSF1A-205ENST00000534885 WNT8BQ93098 351 aa22.02■■□□□ 1.12
TNFRSF1A-205ENST00000534885 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.02■■□□□ 1.123e-10■■■■■ 130.4
TNFRSF1A-205ENST00000534885 APEX2Q9UBZ4 518 aa22.02■■□□□ 1.12
TNFRSF1A-205ENST00000534885 PLEKP08567 350 aaPredicted RBP22.02■■□□□ 1.11
TNFRSF1A-205ENST00000534885 EIF4BP23588 611 aaKnown RBP22.02■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ACLYP53396 1101 aa22.02■■□□□ 1.11
TNFRSF1A-205ENST00000534885 RAPGEF1Q13905 1077 aa22.02■■□□□ 1.11
TNFRSF1A-205ENST00000534885 SNX17Q15036 470 aa22.02■■□□□ 1.11
TNFRSF1A-205ENST00000534885 KCND1Q9NSA2 647 aa22.02■■□□□ 1.11
TNFRSF1A-205ENST00000534885 WBP1LQ9NX94 342 aa22.02■■□□□ 1.11
TNFRSF1A-205ENST00000534885 COQ4Q9Y3A0 265 aa22.02■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ANK1P16157 1881 aa22.02■■□□□ 1.11
TNFRSF1A-205ENST00000534885 A0A1B0GUA9 196 aa22.01■■□□□ 1.11
TNFRSF1A-205ENST00000534885 C15orf39Q6ZRI6 1047 aa22.01■■□□□ 1.11
TNFRSF1A-205ENST00000534885 CATSPER4Q7RTX7 472 aa22.01■■□□□ 1.11
TNFRSF1A-205ENST00000534885 SESTD1Q86VW0 696 aa22.01■■□□□ 1.11
TNFRSF1A-205ENST00000534885 FAM212AQ96EL1 285 aa22.01■■□□□ 1.11
TNFRSF1A-205ENST00000534885 SPAG5Q96R06 1193 aa22.01■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ARHGAP20Q9P2F6 1191 aa22.01■■□□□ 1.11
TNFRSF1A-205ENST00000534885 HOXA11P31270 313 aaPredicted RBP22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ENOX2Q16206 610 aaKnown RBP22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 SFMBT2Q5VUG0 894 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 NME8Q8N427 588 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 FBXL13Q8NEE6 735 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 VTI1AQ96AJ9 217 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 CGRRF1Q99675 332 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 NUCKS1Q9H1E3 243 aaKnown RBP22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 DNAJC12Q9UKB3 198 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 PPP2R2CQ9Y2T4 447 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 MCF2P10911 925 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 JAM2P57087 298 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 CDK17Q00537 523 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 TDRD10Q5VZ19 366 aaKnown RBP22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 HGSNATQ68CP4 663 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 SERINC5Q86VE9 423 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ARHGEF19Q8IW93 802 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 OR5B17Q8NGF7 314 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 SYN2Q92777 582 aaPredicted RBP22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 ELMO3Q96BJ8 720 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 PPP1R13BQ96KQ4 1090 aa22■■□□□ 1.11
TNFRSF1A-205ENST00000534885 NHEJ1Q9H9Q4 299 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms