RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ECT2Q9H8V3 914 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 RBPJLQ9UBG7 517 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 SLC4A7Q9Y6M7 1214 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 LSM1O15116 133 aaKnown RBP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 CLIC2O15247 247 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 MFAP3LO75121 409 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 FOSP01100 380 aaPredicted RBP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 KCNA2P16389 499 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 CYLC1P35663 651 aaPredicted RBP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 MAGEA8P43361 318 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 CARSP49589 748 aaKnown RBP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 MAGOHP61326 146 aaKnown RBP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 KCNJ2P63252 427 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 ANO5Q75V66 913 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 SLFN12Q8IYM2 578 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 TMEM130Q8N3G9 435 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 PPP1R13LQ8WUF5 828 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 MAGOHBQ96A72 148 aaKnown RBP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 CDK5RAP3Q96JB5 506 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 FAM20AQ96MK3 541 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 KRT12Q99456 494 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 TUBGCP2Q9BSJ2 902 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 UBE2OQ9C0C9 1292 aaKnown RBP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 CUEDC2Q9H467 287 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 MLXIPLQ9NP71 852 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 MAGEC2Q9UBF1 373 aaPredicted RBP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 LNPEPQ9UIQ6 1025 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 TBX3O15119 743 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 BUB1O43683 1085 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 GAS7O60861 476 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 EDN1P05305 212 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 IMPDH2P12268 514 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 KLC1Q07866 573 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 MTMR1Q13613 665 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 RCN2Q14257 317 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 TDRD12Q587J7 1177 aaKnown RBP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 HERC4Q5GLZ8 1057 aaPredicted RBP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 MB21D1Q8N884 522 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 CEP70Q8NHQ1 597 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 BSNDQ8WZ55 320 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 ARHGEF2Q92974 986 aaKnown RBP9.69□□□□□ -0.86
SF3B2-216ENST00000534765 PORCNQ9H237 461 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 ZNF408Q9H9D4 720 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 SCN4AP35499 1836 aa9.69□□□□□ -0.86
SF3B2-216ENST00000534765 PITPNM2Q9BZ72 1349 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 A0A0G2JLL6 359 aaPredicted RBP9.68□□□□□ -0.86
SF3B2-216ENST00000534765 ZNF263O14978 683 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 NCK2O43639 380 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 NOL4O94818 638 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 DCAF15Q66K64 600 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 GADL1Q6ZQY3 521 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 PRRT2Q7Z6L0 340 aaPredicted RBP9.68□□□□□ -0.86
SF3B2-216ENST00000534765 ANKRD23Q86SG2 305 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 VSIG10LQ86VR7 867 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 NSRP1Q9H0G5 558 aaKnown RBP9.68□□□□□ -0.86
SF3B2-216ENST00000534765 ASCC2Q9H1I8 757 aaPredicted RBP9.68□□□□□ -0.86
SF3B2-216ENST00000534765 SH2D4AQ9H788 454 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 ADGRA3Q8IWK6 1321 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 GLTPD2A6NH11 291 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 UBTFL6P0CB48 400 aaPredicted RBP9.68□□□□□ -0.86
SF3B2-216ENST00000534765 GCLCP48506 637 aaPredicted RBP9.68□□□□□ -0.86
SF3B2-216ENST00000534765 KRT83P78385 493 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 GJC2Q5T442 439 aaPredicted RBP9.68□□□□□ -0.86
SF3B2-216ENST00000534765 NFRKBQ6P4R8 1299 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 LBX2Q6XYB7 198 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 TMCO5AQ8N6Q1 288 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 RPGRIP1Q96KN7 1286 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 SIK3Q9Y2K2 1263 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 HNRNPRO43390 633 aaKnown RBP9.68□□□□□ -0.86
SF3B2-216ENST00000534765 OPHN1O60890 802 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 AKAP3O75969 853 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 NDUFA10O95299 355 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 NR3C2P08235 984 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 ZCCHC18P0CG32 403 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 GJA8P48165 433 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 COG7P83436 770 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 ADCY1Q08828 1119 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 FAM26FQ5R3K3 315 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 PPP4R3CPQ6ZMV5 832 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 CCDC60Q8IWA6 550 aaPredicted RBP9.68□□□□□ -0.86
SF3B2-216ENST00000534765 ANKRD42Q8N9B4 389 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 TAF4BQ92750 862 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 DCPSQ96C86 337 aaKnown RBP9.68□□□□□ -0.86
SF3B2-216ENST00000534765 CCDC42Q96M95 316 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 PANX2Q96RD6 677 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 PTPN18Q99952 460 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 POLR3CQ9BUI4 534 aaPredicted RBP9.68□□□□□ -0.86
SF3B2-216ENST00000534765 MOV10L1Q9BXT6 1211 aaKnown RBP9.68□□□□□ -0.86
SF3B2-216ENST00000534765 HAUS4Q9H6D7 363 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 KCNK9Q9NPC2 374 aa9.68□□□□□ -0.86
SF3B2-216ENST00000534765 UNC80Q8N2C7 3258 aa9.67□□□□□ -0.86
SF3B2-216ENST00000534765 PVALEFA0A1B0GWK0 134 aa9.67□□□□□ -0.86
SF3B2-216ENST00000534765 CCT8L1PA6NM43 557 aa9.67□□□□□ -0.86
SF3B2-216ENST00000534765 ALDH5A1P51649 535 aaPredicted RBP9.67□□□□□ -0.86
SF3B2-216ENST00000534765 NUGGCQ68CJ6 796 aa9.67□□□□□ -0.86
SF3B2-216ENST00000534765 SULF1Q8IWU6 871 aa9.67□□□□□ -0.86
SF3B2-216ENST00000534765 SH3GL2Q99962 352 aa9.67□□□□□ -0.86
SF3B2-216ENST00000534765 PAGR1Q9BTK6 254 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms