RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 USO1O60763 962 aaKnown RBP13.88□□□□□ -0.19
USF1-211ENST00000534633 RFPL2O75678 378 aa13.88□□□□□ -0.19
USF1-211ENST00000534633 NPTXRO95502 500 aa13.88□□□□□ -0.19
USF1-211ENST00000534633 NPR3P17342 541 aa13.88□□□□□ -0.19
USF1-211ENST00000534633 SYT1P21579 422 aa13.88□□□□□ -0.19
USF1-211ENST00000534633 AKAP5P24588 427 aa13.88□□□□□ -0.19
USF1-211ENST00000534633 GBP2P32456 591 aaPredicted RBP13.88□□□□□ -0.19
USF1-211ENST00000534633 SAFBQ15424 915 aaKnown RBP eCLIP13.88□□□□□ -0.19
USF1-211ENST00000534633 PPP4R3CPQ6ZMV5 832 aa13.88□□□□□ -0.19
USF1-211ENST00000534633 MCPH1Q8NEM0 835 aa13.88□□□□□ -0.19
USF1-211ENST00000534633 SMG7Q92540 1137 aaKnown RBP13.88□□□□□ -0.19
USF1-211ENST00000534633 NXPE3Q969Y0 559 aa13.88□□□□□ -0.19
USF1-211ENST00000534633 ZNF707Q96C28 371 aaPredicted RBP13.88□□□□□ -0.19
USF1-211ENST00000534633 RTP3Q9BQQ7 232 aa13.88□□□□□ -0.19
USF1-211ENST00000534633 GPR62Q9BZJ7 368 aa13.88□□□□□ -0.19
USF1-211ENST00000534633 ZDHHC7Q9NXF8 308 aa13.88□□□□□ -0.19
USF1-211ENST00000534633 EPS15L1Q9UBC2 864 aa13.88□□□□□ -0.19
USF1-211ENST00000534633 ADAM28Q9UKQ2 775 aa13.88□□□□□ -0.19
USF1-211ENST00000534633 PTPRZ1P23471 2315 aaPredicted RBP13.87□□□□□ -0.19
USF1-211ENST00000534633 RIF1Q5UIP0 2472 aaKnown RBP13.87□□□□□ -0.19
USF1-211ENST00000534633 DMDP11532 3685 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 POTEMA6NI47 508 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 LRRIQ4A6NIV6 560 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 TGM5O43548 720 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 FAM187BQ17R55 369 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 CDCA2Q69YH5 1023 aaPredicted RBP13.87□□□□□ -0.19
USF1-211ENST00000534633 ASCL5Q7RTU5 278 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 CDR2LQ86X02 465 aaPredicted RBP13.87□□□□□ -0.19
USF1-211ENST00000534633 PALB2Q86YC2 1186 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 HSCBQ8IWL3 235 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 SIX5Q8N196 739 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 B3GALT6Q96L58 329 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 NT5C3AQ9H0P0 336 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 PIDD1Q9HB75 910 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 TUFT1Q9NNX1 390 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 PRMT7Q9NVM4 692 aaPredicted RBP13.87□□□□□ -0.19
USF1-211ENST00000534633 WNT16Q9UBV4 365 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 PARP2Q9UGN5 583 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 KIF3AQ9Y496 699 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 MIA3Q5JRA6 1907 aa13.87□□□□□ -0.19
USF1-211ENST00000534633 PRR23AA6NEV1 266 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 NARSO43776 548 aaKnown RBP13.86□□□□□ -0.19
USF1-211ENST00000534633 TADA2AO75478 443 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 SPATA31D3P0C874 917 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 SPATA31C1P0DKV0 1188 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 MYBP10242 640 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 HSP90AA2PQ14568 343 aaPredicted RBP13.86□□□□□ -0.19
USF1-211ENST00000534633 NBR1Q14596 966 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 LILRA6Q6PI73 481 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 SPATA31D4Q6ZUB0 917 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 ZBTB8OSQ8IWT0 167 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 CCDC105Q8IYK2 499 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 C4orf32Q8N8J7 132 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 RSAD2Q8WXG1 361 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 RIN2Q8WYP3 895 aaPredicted RBP13.86□□□□□ -0.19
USF1-211ENST00000534633 MYADMQ96S97 322 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 PRKD2Q9BZL6 878 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 C2orf40Q9H1Z8 148 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 TMEM60Q9H2L4 133 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 FZD8Q9H461 694 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 GPRC5CQ9NQ84 441 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.86□□□□□ -0.19
USF1-211ENST00000534633 KLK14Q9P0G3 267 aa13.86□□□□□ -0.19
USF1-211ENST00000534633 SF3B1O75533 1304 aaKnown RBP eCLIP13.86□□□□□ -0.19
USF1-211ENST00000534633 FANCMQ8IYD8 2048 aa13.85□□□□□ -0.19
USF1-211ENST00000534633 A0A087WWV3 80 aa13.85□□□□□ -0.19
USF1-211ENST00000534633 N4BP3O15049 544 aa13.85□□□□□ -0.19
USF1-211ENST00000534633 PI15O43692 258 aa13.85□□□□□ -0.19
USF1-211ENST00000534633 ATP2B1P20020 1258 aa13.85□□□□□ -0.19
USF1-211ENST00000534633 TUSC3Q13454 348 aa13.85□□□□□ -0.19
USF1-211ENST00000534633 MAEAQ7L5Y9 396 aa13.85□□□□□ -0.19
USF1-211ENST00000534633 CATSPER3Q86XQ3 398 aa13.85□□□□□ -0.19
USF1-211ENST00000534633 GLYCTKQ8IVS8 523 aa13.85□□□□□ -0.19
USF1-211ENST00000534633 SLC44A3Q8N4M1 653 aa13.85□□□□□ -0.19
USF1-211ENST00000534633 SPRYD3Q8NCJ5 442 aa13.85□□□□□ -0.19
USF1-211ENST00000534633 NKD2Q969F2 451 aaPredicted RBP13.85□□□□□ -0.19
USF1-211ENST00000534633 NACC1Q96RE7 527 aa13.85□□□□□ -0.19
USF1-211ENST00000534633 POLR3CQ9BUI4 534 aaPredicted RBP13.85□□□□□ -0.19
USF1-211ENST00000534633 DAXXQ9UER7 740 aaPredicted RBP13.85□□□□□ -0.19
USF1-211ENST00000534633 SPTBN4Q9H254 2564 aa13.85□□□□□ -0.19
USF1-211ENST00000534633 CITO14578 2027 aa13.85□□□□□ -0.19
USF1-211ENST00000534633 H3BQV1 296 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 MED24O75448 989 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 ZMYND10O75800 440 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 CFHP08603 1231 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 SRFP11831 508 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 LAMP2P13473 410 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 MCM7P33993 719 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 ORC2Q13416 577 aaPredicted RBP13.84□□□□□ -0.19
USF1-211ENST00000534633 ZNF174Q15697 407 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 MAPK6Q16659 721 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 RTP2Q5QGT7 225 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 MCTP1Q6DN14 999 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 FRMD5Q7Z6J6 570 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 DTWD2Q8NBA8 298 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 RABGGTAQ92696 567 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 PAAF1Q9BRP4 392 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 ADPGKQ9BRR6 497 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 PDZD7Q9H5P4 517 aa13.84□□□□□ -0.19
USF1-211ENST00000534633 FBXW11Q9UKB1 542 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms