RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 PP2D1A8MPX8 630 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 PTGESO14684 152 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 GLUD1P00367 558 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 EDN1P05305 212 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 THP07101 528 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 SPATA31D3P0C874 917 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 MYBP10242 640 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 PRPHP41219 470 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 TUSC3Q13454 348 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 HSP90AA2PQ14568 343 aaPredicted RBP9.82□□□□□ -0.84
COPB1-211ENST00000534234 RILPL1Q5EBL4 403 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 EEF1DP3Q658K8 133 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 ELMSAN1Q6PJG2 1045 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 C15orf39Q6ZRI6 1047 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 SPATA31D4Q6ZUB0 917 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 CCDC149Q6ZUS6 474 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 PALB2Q86YC2 1186 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 GPR65Q8IYL9 337 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 ZDHHC14Q8IZN3 488 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 TDRD5Q8NAT2 981 aaKnown RBP9.82□□□□□ -0.84
COPB1-211ENST00000534234 RIN2Q8WYP3 895 aaPredicted RBP9.82□□□□□ -0.84
COPB1-211ENST00000534234 ACSF2Q96CM8 615 aaPredicted RBP9.82□□□□□ -0.84
COPB1-211ENST00000534234 ASIC4Q96FT7 647 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 PAAF1Q9BRP4 392 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 UPF2Q9HAU5 1272 aaKnown RBP9.82□□□□□ -0.84
COPB1-211ENST00000534234 MAN1C1Q9NR34 630 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.82□□□□□ -0.84
COPB1-211ENST00000534234 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.82□□□□□ -0.84
COPB1-211ENST00000534234 CACNG4Q9UBN1 327 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 GDAQ9Y2T3 454 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 ZMYM2Q9UBW7 1377 aa9.82□□□□□ -0.84
COPB1-211ENST00000534234 CASTOR2A6NHX0 329 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 H3BQV1 296 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 RECQL4O94761 1208 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 BRD1O95696 1058 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 ASGR2P07307 311 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 GJB2P29033 226 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 PEX3P56589 373 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 MTMR3Q13615 1198 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 ZRSR1Q15695 479 aaKnown RBP9.81□□□□□ -0.84
COPB1-211ENST00000534234 IER5LQ5T953 404 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 NT5DC1Q5TFE4 455 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 ATF7IP2Q5U623 682 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 OTOP3Q7RTS5 596 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 GLYCTKQ8IVS8 523 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 UBALD2Q8IYN6 164 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 CMASQ8NFW8 434 aaPredicted RBP9.81□□□□□ -0.84
COPB1-211ENST00000534234 CXCL16Q9H2A7 254 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 FNIP2Q9P278 1114 aa9.81□□□□□ -0.84
COPB1-211ENST00000534234 DAXXQ9UER7 740 aaPredicted RBP9.81□□□□□ -0.84
COPB1-211ENST00000534234 SFI1A8K8P3 1242 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 TGM5O43548 720 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 RFPL2O75678 378 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 CD2BP2O95400 341 aaKnown RBP9.8□□□□□ -0.84
COPB1-211ENST00000534234 C1RP00736 705 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 RPL17P18621 184 aaKnown RBP9.8□□□□□ -0.84
COPB1-211ENST00000534234 NPTX2P47972 431 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 NHLH1Q02575 133 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 NAB2Q15742 525 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 DCAF4L1Q3SXM0 396 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 RTP2Q5QGT7 225 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 FAM171A1Q5VUB5 890 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 RINT1Q6NUQ1 792 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 LILRA6Q6PI73 481 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 PRSS55Q6UWB4 352 aaPredicted RBP9.8□□□□□ -0.84
COPB1-211ENST00000534234 C1orf186Q6ZWK4 172 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 KCNK18Q7Z418 384 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 APBB1IPQ7Z5R6 666 aaPredicted RBP9.8□□□□□ -0.84
COPB1-211ENST00000534234 CEP57Q86XR8 500 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 HASPINQ8TF76 798 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 HDAC7Q8WUI4 952 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 MMTAG2Q9BU76 263 aaKnown RBP9.8□□□□□ -0.84
COPB1-211ENST00000534234 RUSC1Q9BVN2 902 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 PLEKHA4Q9H4M7 779 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 RBM19Q9Y4C8 960 aaKnown RBP9.8□□□□□ -0.84
COPB1-211ENST00000534234 SF3B1O75533 1304 aaKnown RBP eCLIP9.8□□□□□ -0.848e-14■■■■■ 28.8
COPB1-211ENST00000534234 HIP1RO75146 1068 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 KIF4AO95239 1232 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 PDGFBP01127 241 aaPredicted RBP9.8□□□□□ -0.84
COPB1-211ENST00000534234 AVPR2P30518 371 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 MCM2P49736 904 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 ATP2C1P98194 919 aaPredicted RBP9.8□□□□□ -0.84
COPB1-211ENST00000534234 CREMQ03060 361 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 DMP1Q13316 513 aaPredicted RBP9.8□□□□□ -0.84
COPB1-211ENST00000534234 CYP26C1Q6V0L0 522 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 ALYREFQ86V81 257 aaKnown RBP9.8□□□□□ -0.84
COPB1-211ENST00000534234 DAW1Q8N136 415 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 DRC1Q96MC2 740 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 ACO2Q99798 780 aaKnown RBP9.8□□□□□ -0.84
COPB1-211ENST00000534234 PRRX2Q99811 253 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 TCHPQ9BT92 498 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 TTPALQ9BTX7 342 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 RHOBTB2Q9BYZ6 727 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 NT5C3AQ9H0P0 336 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 SMOC2Q9H3U7 446 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 TMEM134Q9H6X4 195 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 WDR6Q9NNW5 1121 aaKnown RBP9.8□□□□□ -0.84
COPB1-211ENST00000534234 KMT5AQ9NQR1 393 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 SMC3Q9UQE7 1217 aa9.8□□□□□ -0.84
COPB1-211ENST00000534234 TNFSF13BQ9Y275 285 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms