RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 ZSWIM4Q9H7M6 989 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 KLK14Q9P0G3 267 aa16.61■□□□□ 0.25
CTSB-230ENST00000534149 NPTXRO95502 500 aa16.6■□□□□ 0.25
CTSB-230ENST00000534149 STARD6P59095 220 aa16.6■□□□□ 0.25
CTSB-230ENST00000534149 CREMQ03060 361 aa16.6■□□□□ 0.25
CTSB-230ENST00000534149 SPIRE1Q08AE8 756 aa16.6■□□□□ 0.25
CTSB-230ENST00000534149 GRIK3Q13003 919 aa16.6■□□□□ 0.25
CTSB-230ENST00000534149 PUM1Q14671 1186 aaKnown RBP eCLIP16.6■□□□□ 0.25
CTSB-230ENST00000534149 PIK3AP1Q6ZUJ8 805 aa16.6■□□□□ 0.25
CTSB-230ENST00000534149 TPH2Q8IWU9 490 aa16.6■□□□□ 0.25
CTSB-230ENST00000534149 GPR65Q8IYL9 337 aa16.6■□□□□ 0.25
CTSB-230ENST00000534149 MAML2Q8IZL2 1156 aaPredicted RBP16.6■□□□□ 0.25
CTSB-230ENST00000534149 HASPINQ8TF76 798 aa16.6■□□□□ 0.25
CTSB-230ENST00000534149 PAAF1Q9BRP4 392 aa16.6■□□□□ 0.25
CTSB-230ENST00000534149 PHF20Q9BVI0 1012 aa16.6■□□□□ 0.25
CTSB-230ENST00000534149 PARP2Q9UGN5 583 aa16.6■□□□□ 0.25
CTSB-230ENST00000534149 FBXW11Q9UKB1 542 aa16.6■□□□□ 0.25
CTSB-230ENST00000534149 PATJQ8NI35 1801 aa16.59■□□□□ 0.25
CTSB-230ENST00000534149 TBX3O15119 743 aa16.59■□□□□ 0.25
CTSB-230ENST00000534149 TADA2AO75478 443 aa16.59■□□□□ 0.25
CTSB-230ENST00000534149 SNW1Q13573 536 aaKnown RBP16.59■□□□□ 0.25
CTSB-230ENST00000534149 HSP90AA2PQ14568 343 aaPredicted RBP16.59■□□□□ 0.25
CTSB-230ENST00000534149 SLC27A1Q6PCB7 646 aa16.59■□□□□ 0.25
CTSB-230ENST00000534149 CPLX2Q6PUV4 134 aaKnown RBP16.59■□□□□ 0.25
CTSB-230ENST00000534149 OXER1Q8TDS5 423 aa16.59■□□□□ 0.25
CTSB-230ENST00000534149 ZNF274Q96GC6 653 aaPredicted RBP16.59■□□□□ 0.25
CTSB-230ENST00000534149 SHDQ96IW2 340 aa16.59■□□□□ 0.25
CTSB-230ENST00000534149 ZSWIM6Q9HCJ5 1215 aa16.59■□□□□ 0.25
CTSB-230ENST00000534149 CDH7Q9ULB5 785 aa16.59■□□□□ 0.25
CTSB-230ENST00000534149 ZFP37Q9Y6Q3 630 aaPredicted RBP16.59■□□□□ 0.25
CTSB-230ENST00000534149 SF3B1O75533 1304 aaKnown RBP eCLIP16.59■□□□□ 0.257e-10■■■■■ 92.9
CTSB-230ENST00000534149 CASTOR2A6NHX0 329 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 KINO60870 393 aaKnown RBP16.58■□□□□ 0.24
CTSB-230ENST00000534149 DTNBO60941 627 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 SLITRK3O94933 977 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 GLRA2P23416 452 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 ARL2P36404 184 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 POU5F1BQ06416 359 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 EARS2Q5JPH6 523 aaKnown RBP16.58■□□□□ 0.24
CTSB-230ENST00000534149 LIN9Q5TKA1 542 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 SUMF1Q8NBK3 374 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 CLSTN3Q9BQT9 956 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 GJB4Q9NTQ9 266 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 SPATA6Q9NWH7 488 aaPredicted RBP16.58■□□□□ 0.24
CTSB-230ENST00000534149 POLIQ9UNA4 740 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 CYP46A1Q9Y6A2 500 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 VWA8A3KMH1 1905 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 CACNA1BQ00975 2339 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 SPTBN2O15020 2390 aa16.58■□□□□ 0.24
CTSB-230ENST00000534149 ZMYM2Q9UBW7 1377 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 KANSL1LA0AUZ9 987 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 FAM205CA6NFA0 338 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 CCL16O15467 120 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 KIF4AO95239 1232 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 C8AP07357 584 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 UBXN2BQ14CS0 331 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 MLF2Q15773 248 aaPredicted RBP16.57■□□□□ 0.24
CTSB-230ENST00000534149 PSMD5Q16401 504 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 PPM1LQ5SGD2 360 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 CEP57Q86XR8 500 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 SLFN12Q8IYM2 578 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 FGF13Q92913 245 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 NAP1L4Q99733 375 aaKnown RBP16.57■□□□□ 0.24
CTSB-230ENST00000534149 EIF2AK1Q9BQI3 630 aaKnown RBP16.57■□□□□ 0.24
CTSB-230ENST00000534149 TTPALQ9BTX7 342 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 NFKBIZQ9BYH8 718 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 DLL3Q9NYJ7 618 aa16.57■□□□□ 0.24
CTSB-230ENST00000534149 MTF2Q9Y483 593 aaPredicted RBP16.57■□□□□ 0.24
CTSB-230ENST00000534149 TPRP12270 2363 aaKnown RBP16.56■□□□□ 0.24
CTSB-230ENST00000534149 A0A1B0GUA9 196 aa16.56■□□□□ 0.24
CTSB-230ENST00000534149 ADAM12O43184 909 aa16.56■□□□□ 0.24
CTSB-230ENST00000534149 LAMTOR5O43504 91 aa16.56■□□□□ 0.24
CTSB-230ENST00000534149 DGAT1O75907 488 aa16.56■□□□□ 0.24
CTSB-230ENST00000534149 REC8O95072 547 aa16.56■□□□□ 0.24
CTSB-230ENST00000534149 BAG4O95429 457 aaKnown RBP16.56■□□□□ 0.24
CTSB-230ENST00000534149 HNRNPA1P09651 372 aaKnown RBP eCLIP16.56■□□□□ 0.24
CTSB-230ENST00000534149 TUSC3Q13454 348 aa16.56■□□□□ 0.24
CTSB-230ENST00000534149 RSPO4Q2I0M5 234 aaPredicted RBP16.56■□□□□ 0.24
CTSB-230ENST00000534149 SLC44A4Q53GD3 710 aa16.56■□□□□ 0.24
CTSB-230ENST00000534149 FAM171A1Q5VUB5 890 aa16.56■□□□□ 0.24
CTSB-230ENST00000534149 MTSS1LQ765P7 747 aa16.56■□□□□ 0.24
CTSB-230ENST00000534149 ITFG1Q8TB96 612 aa16.56■□□□□ 0.24
CTSB-230ENST00000534149 LNX1Q8TBB1 728 aaPredicted RBP16.56■□□□□ 0.24
CTSB-230ENST00000534149 PIK3R5Q8WYR1 880 aa16.56■□□□□ 0.24
CTSB-230ENST00000534149 CCDC43Q96MW1 224 aaKnown RBP16.56■□□□□ 0.24
CTSB-230ENST00000534149 KXD1Q9BQD3 176 aa16.56■□□□□ 0.24
CTSB-230ENST00000534149 DDX23Q9BUQ8 820 aaKnown RBP16.56■□□□□ 0.24
CTSB-230ENST00000534149 BCO2Q9BYV7 579 aa16.56■□□□□ 0.24
CTSB-230ENST00000534149 POLR3FQ9H1D9 316 aaPredicted RBP16.56■□□□□ 0.24
CTSB-230ENST00000534149 NOTCH4Q99466 2003 aa16.56■□□□□ 0.24
CTSB-230ENST00000534149 A0A087WWV3 80 aa16.55■□□□□ 0.24
CTSB-230ENST00000534149 LYPLA2O95372 231 aa16.55■□□□□ 0.24
CTSB-230ENST00000534149 CD72P21854 359 aa16.55■□□□□ 0.24
CTSB-230ENST00000534149 RARRES1P49788 294 aa16.55■□□□□ 0.24
CTSB-230ENST00000534149 PRKCQQ04759 706 aa16.55■□□□□ 0.24
CTSB-230ENST00000534149 SLC7A14Q8TBB6 771 aa16.55■□□□□ 0.24
CTSB-230ENST00000534149 ANKEF1Q9NU02 776 aa16.55■□□□□ 0.24
CTSB-230ENST00000534149 HCFC1R1Q9NWW0 138 aa16.55■□□□□ 0.24
CTSB-230ENST00000534149 NCDNQ9UBB6 729 aa16.55■□□□□ 0.24
CTSB-230ENST00000534149 LRRIQ4A6NIV6 560 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms