RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 PRDM4Q9UKN5 801 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.33□□□□□ -1.56
ITGB1-219ENST00000534049 PLB1Q6P1J6 1458 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 TMEM191CA6NGB0 347 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 PRR5-ARHGAP8B1AHC4 643 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 DIRC3C9JPN6 131 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 SUV39H1O43463 412 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 CLEC2LP0C7M8 214 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 LGALS4P56470 323 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 TRIM25Q14258 630 aaKnown RBP5.32□□□□□ -1.56
ITGB1-219ENST00000534049 VPS72Q15906 364 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 TAF3Q5VWG9 929 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 C1QL3Q5VWW1 255 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 GIMAP6Q6P9H5 292 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 DRICH1Q6PGQ1 229 aaPredicted RBP5.32□□□□□ -1.56
ITGB1-219ENST00000534049 AFAP1L2Q8N4X5 818 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 ZNF276Q8N554 614 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 MSL3Q8N5Y2 521 aaKnown RBP5.32□□□□□ -1.56
ITGB1-219ENST00000534049 CLRN3Q8NCR9 226 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 ZNF480Q8WV37 535 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 NEU4Q8WWR8 484 aaPredicted RBP5.32□□□□□ -1.56
ITGB1-219ENST00000534049 ZNF622Q969S3 477 aaKnown RBP eCLIP5.32□□□□□ -1.565e-8■□□□□ 8.1
ITGB1-219ENST00000534049 TRIM44Q96DX7 344 aaPredicted RBP5.32□□□□□ -1.56
ITGB1-219ENST00000534049 CLIP3Q96DZ5 547 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 DCLRE1CQ96SD1 692 aaKnown RBP5.32□□□□□ -1.56
ITGB1-219ENST00000534049 MAP7D2Q96T17 732 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 TOPORSQ9NS56 1045 aaPredicted RBP5.32□□□□□ -1.56
ITGB1-219ENST00000534049 SAMD9Q5K651 1589 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 WDR7Q9Y4E6 1490 aa5.32□□□□□ -1.56
ITGB1-219ENST00000534049 RPTORQ8N122 1335 aa5.31□□□□□ -1.56
ITGB1-219ENST00000534049 LCHNA4D1U4 455 aa5.31□□□□□ -1.56
ITGB1-219ENST00000534049 STC2O76061 302 aa5.31□□□□□ -1.56
ITGB1-219ENST00000534049 MASP1P48740 699 aa5.31□□□□□ -1.56
ITGB1-219ENST00000534049 APBA1Q02410 837 aa5.31□□□□□ -1.56
ITGB1-219ENST00000534049 ANO4Q32M45 955 aa5.31□□□□□ -1.56
ITGB1-219ENST00000534049 FAM214AQ32MH5 1076 aa5.31□□□□□ -1.56
ITGB1-219ENST00000534049 IGFL4Q6B9Z1 124 aa5.31□□□□□ -1.56
ITGB1-219ENST00000534049 KRT26Q7Z3Y9 468 aa5.31□□□□□ -1.56
ITGB1-219ENST00000534049 ULK2Q8IYT8 1036 aa5.31□□□□□ -1.56
ITGB1-219ENST00000534049 AUTS2Q8WXX7 1259 aa5.31□□□□□ -1.56
ITGB1-219ENST00000534049 PGBD4Q96DM1 585 aa5.31□□□□□ -1.56
ITGB1-219ENST00000534049 NRDE2Q9H7Z3 1164 aa5.31□□□□□ -1.56
ITGB1-219ENST00000534049 EIF2B4Q9UI10 523 aaKnown RBP5.31□□□□□ -1.56
ITGB1-219ENST00000534049 ING1Q9UK53 422 aaPredicted RBP5.31□□□□□ -1.56
ITGB1-219ENST00000534049 FZD1Q9UP38 647 aa5.31□□□□□ -1.56
ITGB1-219ENST00000534049 GAGE12BA1L429 117 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 GAGE12HA6NDE8 117 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 TMEM127O75204 238 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 ITGB1P05556 798 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 VIL1P09327 827 aaKnown RBP5.3□□□□□ -1.56
ITGB1-219ENST00000534049 HK1P19367 917 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 CTSSP25774 331 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 SLC25A3Q00325 362 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 PDCD1Q15116 288 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 CT83Q5H943 113 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 BTNL9Q6UXG8 535 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 MRGPRGQ86SM5 289 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 SECISBP2LQ93073 1101 aaKnown RBP5.3□□□□□ -1.56
ITGB1-219ENST00000534049 EAF2Q96CJ1 260 aaPredicted RBP5.3□□□□□ -1.56
ITGB1-219ENST00000534049 NDC1Q9BTX1 674 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 SLC46A2Q9BY10 475 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 KCNH6Q9H252 994 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 CHMP4BQ9H444 224 aaKnown RBP5.3□□□□□ -1.56
ITGB1-219ENST00000534049 SLC2A4RGQ9NR83 387 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 GPRC5DQ9NZD1 345 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 ZBTB21Q9ULJ3 1066 aa5.3□□□□□ -1.56
ITGB1-219ENST00000534049 LAS1LQ9Y4W2 734 aaKnown RBP5.3□□□□□ -1.56
ITGB1-219ENST00000534049 GRXCR1A8MXD5 290 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 ITGA10O75578 1167 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 LPLP06858 475 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 SPATA31D3P0C874 917 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 RBP3P10745 1247 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 MMP14P50281 582 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 MST1LQ2TV78 715 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 LY6G5CQ5SRR4 150 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 LRRC55Q6ZSA7 311 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 SPATA31D4Q6ZUB0 917 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 GPRIN1Q7Z2K8 1008 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 SMAP1Q8IYB5 467 aaPredicted RBP5.29□□□□□ -1.56
ITGB1-219ENST00000534049 CPT1CQ8TCG5 803 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 FATE1Q969F0 183 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 CHFRQ96EP1 664 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 ORAI2Q96SN7 254 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 CEP89Q96ST8 783 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 PSMD1Q99460 953 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 GPRC5BQ9NZH0 403 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 SORCS3Q9UPU3 1222 aa5.29□□□□□ -1.56
ITGB1-219ENST00000534049 TSPOAP1O95153 1857 aa5.28□□□□□ -1.56
ITGB1-219ENST00000534049 GOLGA3Q08378 1498 aa5.28□□□□□ -1.56
ITGB1-219ENST00000534049 A0A087X1B8 175 aa5.28□□□□□ -1.56
ITGB1-219ENST00000534049 GOLGA8AA7E2F4 631 aa5.28□□□□□ -1.56
ITGB1-219ENST00000534049 PJA2O43164 708 aa5.28□□□□□ -1.56
ITGB1-219ENST00000534049 FAM20BO75063 409 aa5.28□□□□□ -1.56
ITGB1-219ENST00000534049 RHOBTB3O94955 611 aa5.28□□□□□ -1.56
ITGB1-219ENST00000534049 SCAF4O95104 1147 aaKnown RBP5.28□□□□□ -1.56
ITGB1-219ENST00000534049 TPM2P07951 284 aa5.28□□□□□ -1.56
ITGB1-219ENST00000534049 CNGA1P29973 690 aa5.28□□□□□ -1.56
ITGB1-219ENST00000534049 TNNT2P45379 298 aaPredicted RBP5.28□□□□□ -1.56
ITGB1-219ENST00000534049 ID4P47928 161 aa5.28□□□□□ -1.56
ITGB1-219ENST00000534049 FLT3LGP49771 235 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms