RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 USP28Q96RU2 1077 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 ACO2Q99798 780 aaKnown RBP10.62□□□□□ -0.71
SSBP3-215ENST00000533946 FGFBP2Q9BYJ0 223 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 PANK2Q9BZ23 570 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 CDT1Q9H211 546 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 UPF2Q9HAU5 1272 aaKnown RBP10.62□□□□□ -0.71
SSBP3-215ENST00000533946 NGRNQ9NPE2 291 aaKnown RBP10.62□□□□□ -0.71
SSBP3-215ENST00000533946 PRMT7Q9NVM4 692 aaPredicted RBP10.62□□□□□ -0.71
SSBP3-215ENST00000533946 ARHGAP28Q9P2N2 729 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 PUF60Q9UHX1 559 aaKnown RBP10.62□□□□□ -0.71
SSBP3-215ENST00000533946 FBXO2Q9UK22 296 aaPredicted RBP10.62□□□□□ -0.71
SSBP3-215ENST00000533946 DNM3Q9UQ16 869 aa10.62□□□□□ -0.71
SSBP3-215ENST00000533946 TEX28O15482 410 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 N4BP1O75113 896 aaKnown RBP10.61□□□□□ -0.71
SSBP3-215ENST00000533946 CLCN4P51793 760 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 GUCY2FP51841 1108 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 CDR1P51861 262 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 MAPK6Q16659 721 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 CSPP1Q1MSJ5 1256 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 ATF7IP2Q5U623 682 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 HAUS3Q68CZ6 603 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 SLC39A4Q6P5W5 647 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 POTEHQ6S545 545 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 PALB2Q86YC2 1186 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 ZBTB8OSQ8IWT0 167 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 TMEM161BQ8NDZ6 487 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 CCDC51Q96ER9 411 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 FAM193BQ96PV7 902 aaPredicted RBP10.61□□□□□ -0.71
SSBP3-215ENST00000533946 FIZ1Q96SL8 496 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 REEP2Q9BRK0 252 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 TMEM175Q9BSA9 504 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 TRIM6Q9C030 488 aaPredicted RBP10.61□□□□□ -0.71
SSBP3-215ENST00000533946 TFIP11Q9UBB9 837 aaKnown RBP10.61□□□□□ -0.71
SSBP3-215ENST00000533946 GIT1Q9Y2X7 761 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 ANK1P16157 1881 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 USP34Q70CQ2 3546 aa10.61□□□□□ -0.71
SSBP3-215ENST00000533946 MUC6Q6W4X9 2439 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 MYH15Q9Y2K3 1946 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 COL4A3Q01955 1670 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 PDCD11Q14690 1871 aaKnown RBP10.6□□□□□ -0.71
SSBP3-215ENST00000533946 DENND4AQ7Z401 1863 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 C2CD4DB7Z1M9 353 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 K7ERI5 159 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 NRG2O14511 850 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-215ENST00000533946 NCK2O43639 380 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 PDGFBP01127 241 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-215ENST00000533946 SOD2P04179 222 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 ASGR2P07307 311 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 MAPTP10636 758 aaKnown RBP10.6□□□□□ -0.71
SSBP3-215ENST00000533946 MUTP22033 750 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 PROZP22891 400 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 NMT1P30419 496 aaKnown RBP10.6□□□□□ -0.71
SSBP3-215ENST00000533946 TNFSF9P41273 254 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 BRCC3P46736 316 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 MCM2P49736 904 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 CBX2Q14781 532 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-215ENST00000533946 TMEM132AQ24JP5 1023 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 ZC2HC1CQ53FD0 456 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-215ENST00000533946 GPBP1Q86WP2 473 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 KIFAP3Q92845 792 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 PPP1R10Q96QC0 940 aaKnown RBP10.6□□□□□ -0.71
SSBP3-215ENST00000533946 HERC2P3Q9BVR0 1158 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 ADAM7Q9H2U9 754 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 KMT5AQ9NQR1 393 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 TSHZ2Q9NRE2 1034 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 CHST7Q9NS84 486 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 RNF216Q9NWF9 866 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-215ENST00000533946 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-215ENST00000533946 IRAK3Q9Y616 596 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 NOTCH4Q99466 2003 aa10.6□□□□□ -0.71
SSBP3-215ENST00000533946 MTCL1Q9Y4B5 1905 aaKnown RBP10.59□□□□□ -0.71
SSBP3-215ENST00000533946 CITO14578 2027 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 SMIM28A0A1B0GU29 152 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 ANKRD63C9JTQ0 380 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 LAD1O00515 517 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 PPEF2O14830 753 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 N4BP3O15049 544 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 GUCY2CP25092 1073 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 KLRC2P26717 231 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 CLCNKBP51801 687 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 WNT7BP56706 349 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 KCNA1Q09470 495 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 GIT2Q14161 759 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 SLC10A6Q3KNW5 377 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 PUS10Q3MIT2 529 aaKnown RBP10.59□□□□□ -0.71
SSBP3-215ENST00000533946 PDE12Q6L8Q7 609 aaKnown RBP10.59□□□□□ -0.71
SSBP3-215ENST00000533946 FUT10Q6P4F1 479 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 ALKAL1Q6UXT8 129 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 FAM43BQ6ZT52 329 aaPredicted RBP10.59□□□□□ -0.71
SSBP3-215ENST00000533946 HFE2Q6ZVN8 426 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 GLIS3Q8NEA6 775 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 RIN2Q8WYP3 895 aaPredicted RBP10.59□□□□□ -0.71
SSBP3-215ENST00000533946 STAMQ92783 540 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 ZNF707Q96C28 371 aaPredicted RBP10.59□□□□□ -0.71
SSBP3-215ENST00000533946 IFT74Q96LB3 600 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 PRIMPOLQ96LW4 560 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 RPS6KC1Q96S38 1066 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 PHF7Q9BWX1 381 aaPredicted RBP10.59□□□□□ -0.71
SSBP3-215ENST00000533946 C2orf40Q9H1Z8 148 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 KANSL3Q9P2N6 904 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms