RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 P2RX5Q93086 422 aa15.35■□□□□ 0.05
CMTM1-218ENST00000533915 TSPAN18Q96SJ8 248 aa15.35■□□□□ 0.05
CMTM1-218ENST00000533915 PRO3102Q9H379 93 aa15.35■□□□□ 0.05
CMTM1-218ENST00000533915 RPF1Q9H9Y2 349 aaKnown RBP15.35■□□□□ 0.05
CMTM1-218ENST00000533915 PLEKHA5Q9HAU0 1116 aa15.35■□□□□ 0.05
CMTM1-218ENST00000533915 SNTG2Q9NY99 539 aa15.35■□□□□ 0.05
CMTM1-218ENST00000533915 HSPBP1Q9NZL4 362 aa15.35■□□□□ 0.05
CMTM1-218ENST00000533915 MSRAQ9UJ68 235 aa15.35■□□□□ 0.05
CMTM1-218ENST00000533915 FRMD4BQ9Y2L6 1034 aa15.35■□□□□ 0.05
CMTM1-218ENST00000533915 RANBP2P49792 3224 aaKnown RBP15.35■□□□□ 0.05
CMTM1-218ENST00000533915 ZNF233A6NK53 670 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 CETN3O15182 167 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 EXOC3O60645 756 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 DGKIO75912 1065 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 RECQL4O94761 1208 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 FGFR1OPO95684 399 aaKnown RBP15.34■□□□□ 0.05
CMTM1-218ENST00000533915 NR3C1P04150 777 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 AKAP5P24588 427 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 CCNE1P24864 410 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 ADSSP30520 456 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 CYP2J2P51589 502 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 OSTNP61366 133 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 NFIL3Q16649 462 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 CENPPQ6IPU0 288 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 USP37Q86T82 979 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 CMTR2Q8IYT2 770 aaKnown RBP15.34■□□□□ 0.05
CMTM1-218ENST00000533915 CRIPAKQ8N1N5 446 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 NOC3LQ8WTT2 800 aaKnown RBP15.34■□□□□ 0.05
CMTM1-218ENST00000533915 NELFBQ8WX92 580 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 LPPQ93052 612 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 CBWD1Q9BRT8 395 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 FAM213AQ9BRX8 229 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 NAT10Q9H0A0 1025 aaKnown RBP15.34■□□□□ 0.05
CMTM1-218ENST00000533915 HES2Q9Y543 173 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 PCDHA11Q9Y5I1 949 aa15.34■□□□□ 0.05
CMTM1-218ENST00000533915 ARL5CA6NH57 179 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 TBKBP1A7MCY6 615 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 PPP1R3GB7ZBB8 358 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 TISP43B9A030 160 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 CLIC2O15247 247 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 XPOTO43592 962 aaKnown RBP15.33■□□□□ 0.04
CMTM1-218ENST00000533915 IL18RAPO95256 599 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 CCDC192P0DO97 292 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 FGFR1P11362 822 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 ATF7P17544 494 aaPredicted RBP15.33■□□□□ 0.04
CMTM1-218ENST00000533915 NR2F2P24468 414 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 HTRA4P83105 476 aaPredicted RBP15.33■□□□□ 0.04
CMTM1-218ENST00000533915 FKBP3Q00688 224 aaKnown RBP15.33■□□□□ 0.04
CMTM1-218ENST00000533915 RNASELQ05823 741 aaKnown RBP15.33■□□□□ 0.04
CMTM1-218ENST00000533915 PPP2R3AQ06190 1150 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 BTG3Q14201 252 aaPredicted RBP15.33■□□□□ 0.04
CMTM1-218ENST00000533915 SURF1Q15526 300 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 NOMO2Q5JPE7 1267 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 AGMOQ6ZNB7 445 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 LRRC43Q8N309 656 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 HELQQ8TDG4 1101 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 FAM193BQ96PV7 902 aaPredicted RBP15.33■□□□□ 0.04
CMTM1-218ENST00000533915 PCIF1Q9H4Z3 704 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 SLC38A7Q9NVC3 462 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 COLQQ9Y215 455 aaPredicted RBP15.33■□□□□ 0.04
CMTM1-218ENST00000533915 INPP5FQ9Y2H2 1132 aa15.33■□□□□ 0.04
CMTM1-218ENST00000533915 OFD1O75665 1012 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 BMP6P22004 513 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 ERCC5P28715 1186 aaPredicted RBP15.32■□□□□ 0.04
CMTM1-218ENST00000533915 MLH1P40692 756 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 ACOT2P49753 483 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 SMAD3P84022 425 aaKnown RBP15.32■□□□□ 0.04
CMTM1-218ENST00000533915 ADAM9Q13443 819 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 SNRNP35Q16560 246 aaKnown RBP15.32■□□□□ 0.04
CMTM1-218ENST00000533915 TPD52L1Q16890 204 aaPredicted RBP15.32■□□□□ 0.04
CMTM1-218ENST00000533915 LRIT3Q3SXY7 679 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 FIBCD1Q8N539 461 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 SAAL1Q96ER3 474 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 GAD1Q99259 594 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 HAPLN2Q9GZV7 340 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 RNF39Q9H2S5 420 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 IKZF4Q9H2S9 585 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 SEMA6BQ9H3T3 888 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 ASB7Q9H672 318 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 AAASQ9NRG9 546 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 RBAKQ9NYW8 714 aaPredicted RBP15.32■□□□□ 0.04
CMTM1-218ENST00000533915 RWDD2AQ9UIY3 292 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 CPSF3Q9UKF6 684 aaKnown RBP15.32■□□□□ 0.04
CMTM1-218ENST00000533915 CTNND2Q9UQB3 1225 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 RWDD3Q9Y3V2 267 aa15.32■□□□□ 0.04
CMTM1-218ENST00000533915 TULP1O00294 542 aaPredicted RBP15.31■□□□□ 0.04
CMTM1-218ENST00000533915 INPPL1O15357 1258 aa15.31■□□□□ 0.04
CMTM1-218ENST00000533915 THP07101 528 aa15.31■□□□□ 0.04
CMTM1-218ENST00000533915 PSMC2P35998 433 aaKnown RBP15.31■□□□□ 0.04
CMTM1-218ENST00000533915 GRIK3Q13003 919 aa15.31■□□□□ 0.04
CMTM1-218ENST00000533915 DPCR1Q3MIW9 517 aa15.31■□□□□ 0.04
CMTM1-218ENST00000533915 ZCWPW2Q504Y3 356 aa15.31■□□□□ 0.04
CMTM1-218ENST00000533915 CLLU1OSQ5K130 101 aa15.31■□□□□ 0.04
CMTM1-218ENST00000533915 SPOUT1Q5T280 376 aaKnown RBP15.31■□□□□ 0.04
CMTM1-218ENST00000533915 CEP135Q66GS9 1140 aa15.31■□□□□ 0.04
CMTM1-218ENST00000533915 ANKRD40Q6AI12 368 aa15.31■□□□□ 0.04
CMTM1-218ENST00000533915 NT5DC4Q86YG4 428 aa15.31■□□□□ 0.04
CMTM1-218ENST00000533915 BRSK2Q8IWQ3 736 aa15.31■□□□□ 0.04
CMTM1-218ENST00000533915 CEP120Q8N960 986 aa15.31■□□□□ 0.04
CMTM1-218ENST00000533915 ZNF689Q96CS4 500 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms