RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 CCT8L1PA6NM43 557 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 RIPK2O43353 540 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 COILP38432 576 aaPredicted RBP20.72■□□□□ 0.91
CAPN1-226ENST00000533820 MMP13P45452 471 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 PEX5P50542 639 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 AOC3Q16853 763 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 PODNQ7Z5L7 613 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 SPDYE1Q8NFV5 336 aaPredicted RBP20.72■□□□□ 0.91
CAPN1-226ENST00000533820 IL31RAQ8NI17 732 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 KREMEN1Q96MU8 473 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 KCNK9Q9NPC2 374 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 TBK1Q9UHD2 729 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 CDC25CP30307 473 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 SSTR3P32745 418 aaPredicted RBP20.72■□□□□ 0.91
CAPN1-226ENST00000533820 RBBP5Q15291 538 aaKnown RBP20.72■□□□□ 0.91
CAPN1-226ENST00000533820 C1orf220Q5T0J3 134 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 WLSQ5T9L3 541 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 MEX3CQ5U5Q3 659 aaKnown RBP20.72■□□□□ 0.91
CAPN1-226ENST00000533820 SEPT14Q6ZU15 432 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 SLC13A5Q86YT5 568 aaPredicted RBP20.72■□□□□ 0.91
CAPN1-226ENST00000533820 CPXCR1Q8N123 301 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 GDAP1Q8TB36 358 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 SEMA4DQ92854 862 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 AGBL1Q96MI9 1066 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 TMEM117Q9H0C3 514 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 SAMD15Q9P1V8 674 aa20.72■□□□□ 0.91
CAPN1-226ENST00000533820 LARSQ9P2J5 1176 aaKnown RBP20.72■□□□□ 0.91
CAPN1-226ENST00000533820 KIF13BQ9NQT8 1826 aa20.71■□□□□ 0.91
CAPN1-226ENST00000533820 KLRG2A4D1S0 409 aaPredicted RBP20.71■□□□□ 0.91
CAPN1-226ENST00000533820 ITGB5P18084 799 aa20.71■□□□□ 0.91
CAPN1-226ENST00000533820 PPP2R5EQ16537 467 aa20.71■□□□□ 0.91
CAPN1-226ENST00000533820 INTS8Q75QN2 995 aaKnown RBP20.71■□□□□ 0.91
CAPN1-226ENST00000533820 ANKS4BQ8N8V4 417 aa20.71■□□□□ 0.91
CAPN1-226ENST00000533820 GJD4Q96KN9 370 aaPredicted RBP20.71■□□□□ 0.91
CAPN1-226ENST00000533820 ABCF3Q9NUQ8 709 aa20.71■□□□□ 0.91
CAPN1-226ENST00000533820 MIF4GDA9UHW6 222 aaKnown RBP20.71■□□□□ 0.91
CAPN1-226ENST00000533820 PIK3CDO00329 1044 aa20.71■□□□□ 0.91
CAPN1-226ENST00000533820 ADRB2P07550 413 aa20.71■□□□□ 0.91
CAPN1-226ENST00000533820 DRP2Q13474 957 aa20.71■□□□□ 0.91
CAPN1-226ENST00000533820 AUHQ13825 339 aaKnown RBP20.71■□□□□ 0.91
CAPN1-226ENST00000533820 TNIP1Q15025 636 aa20.71■□□□□ 0.91
CAPN1-226ENST00000533820 RNF207Q6ZRF8 634 aa20.71■□□□□ 0.91
CAPN1-226ENST00000533820 PGM2Q96G03 612 aa20.71■□□□□ 0.91
CAPN1-226ENST00000533820 PI4K2AQ9BTU6 479 aa20.71■□□□□ 0.91
CAPN1-226ENST00000533820 TOM1O60784 492 aa20.7■□□□□ 0.9
CAPN1-226ENST00000533820 SNUPNO95149 360 aaKnown RBP20.7■□□□□ 0.9
CAPN1-226ENST00000533820 EZRP15311 586 aaKnown RBP20.7■□□□□ 0.9
CAPN1-226ENST00000533820 GJC1P36383 396 aa20.7■□□□□ 0.9
CAPN1-226ENST00000533820 SOX10P56693 466 aa20.7■□□□□ 0.9
CAPN1-226ENST00000533820 CALCOCO2Q13137 446 aa20.7■□□□□ 0.9
CAPN1-226ENST00000533820 PLCB4Q15147 1175 aa20.7■□□□□ 0.9
CAPN1-226ENST00000533820 XXYLT1Q8NBI6 393 aa20.7■□□□□ 0.9
CAPN1-226ENST00000533820 HEMGNQ9BXL5 484 aa20.7■□□□□ 0.9
CAPN1-226ENST00000533820 MTUS1Q9ULD2 1270 aa20.7■□□□□ 0.9
CAPN1-226ENST00000533820 MMP10P09238 476 aa20.7■□□□□ 0.9
CAPN1-226ENST00000533820 KRT5P13647 590 aa20.7■□□□□ 0.9
CAPN1-226ENST00000533820 C6orf118Q5T5N4 469 aa20.7■□□□□ 0.9
CAPN1-226ENST00000533820 HAUS6Q7Z4H7 955 aa20.7■□□□□ 0.9
CAPN1-226ENST00000533820 ZHX2Q9Y6X8 837 aa20.7■□□□□ 0.9
CAPN1-226ENST00000533820 GREB1LQ9C091 1923 aaPredicted RBP20.7■□□□□ 0.9
CAPN1-226ENST00000533820 CTNNA2P26232 953 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 CHKAP35790 457 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 RASA3Q14644 834 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 PLA2G4FQ68DD2 849 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 C11orf63Q6NUN7 778 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 BTNL9Q6UXG8 535 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 C3orf20Q8ND61 904 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 KCNH7Q9NS40 1196 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 FGFR1OP2Q9NVK5 253 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 ALDH1B1P30837 517 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 RPS6KA3P51812 740 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 KRT17Q04695 432 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 THEMIS2Q5TEJ8 643 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 PRUNE1Q86TP1 453 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 LDHDQ86WU2 507 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 CDC42EP4Q9H3Q1 356 aaKnown RBP20.69■□□□□ 0.9
CAPN1-226ENST00000533820 ARHGEF10LQ9HCE6 1279 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 CHST7Q9NS84 486 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 PCYOX1Q9UHG3 505 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 UTRNP46939 3433 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 PODXLO00592 558 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 ECEL1O95672 775 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 FMO1Q01740 532 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 SGO2Q562F6 1265 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 FAM102BQ5T8I3 360 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 NOCTQ9UK39 431 aaKnown RBP20.69■□□□□ 0.9
CAPN1-226ENST00000533820 PCDHA3Q9Y5H8 950 aa20.69■□□□□ 0.9
CAPN1-226ENST00000533820 PFASO15067 1338 aa20.68■□□□□ 0.9
CAPN1-226ENST00000533820 PASKQ96RG2 1323 aa20.68■□□□□ 0.9
CAPN1-226ENST00000533820 SIPA1L1O43166 1804 aa20.68■□□□□ 0.9
CAPN1-226ENST00000533820 NFIL3Q16649 462 aa20.68■□□□□ 0.9
CAPN1-226ENST00000533820 KYNUQ16719 465 aa20.68■□□□□ 0.9
CAPN1-226ENST00000533820 STRIP1Q5VSL9 837 aa20.68■□□□□ 0.9
CAPN1-226ENST00000533820 ARMC9Q7Z3E5 817 aa20.68■□□□□ 0.9
CAPN1-226ENST00000533820 EXOC3L1Q86VI1 746 aa20.68■□□□□ 0.9
CAPN1-226ENST00000533820 ACCSQ96QU6 501 aa20.68■□□□□ 0.9
CAPN1-226ENST00000533820 USP20Q9Y2K6 914 aa20.68■□□□□ 0.9
CAPN1-226ENST00000533820 TCP11X1B4DZS4 312 aa20.68■□□□□ 0.9
CAPN1-226ENST00000533820 VIL1P09327 827 aaKnown RBP20.68■□□□□ 0.9
CAPN1-226ENST00000533820 ARHGEF2Q92974 986 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms