RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 WDR6Q9NNW5 1121 aaKnown RBP10.07□□□□□ -0.8
BEST3-207ENST00000533674 DDX25Q9UHL0 483 aaKnown RBP10.07□□□□□ -0.8
BEST3-207ENST00000533674 PCDHA4Q9UN74 947 aa10.07□□□□□ -0.8
BEST3-207ENST00000533674 SIT1Q9Y3P8 196 aa10.07□□□□□ -0.8
BEST3-207ENST00000533674 NID2Q14112 1375 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 B4GALT3O60512 393 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 N4BP1O75113 896 aaKnown RBP10.06□□□□□ -0.8
BEST3-207ENST00000533674 RFPL2O75678 378 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 DCNP07585 359 aaKnown RBP10.06□□□□□ -0.8
BEST3-207ENST00000533674 IFNAR1P17181 557 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 NCLP19338 710 aaKnown RBP10.06□□□□□ -0.8
BEST3-207ENST00000533674 PSMA5P28066 241 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 MLH1P40692 756 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 RFC5P40937 340 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 QARSP47897 775 aaKnown RBP10.06□□□□□ -0.8
BEST3-207ENST00000533674 NPEPPSP55786 919 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 CREMQ03060 361 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 LAMTOR4Q0VGL1 99 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 TFDP1Q14186 410 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 NOTUMQ6P988 496 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 CPLX2Q6PUV4 134 aaKnown RBP10.06□□□□□ -0.8
BEST3-207ENST00000533674 OTUD6AQ7L8S5 288 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 MRPL10Q7Z7H8 261 aaKnown RBP10.06□□□□□ -0.8
BEST3-207ENST00000533674 BLIDQ8IZY5 108 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 SLC44A3Q8N4M1 653 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 RNF149Q8NC42 400 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 GPR152Q8TDT2 470 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 COLEC11Q9BWP8 271 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 PLEKHA4Q9H4M7 779 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 IFT122Q9HBG6 1241 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 NCOA5Q9HCD5 579 aaKnown RBP10.06□□□□□ -0.8
BEST3-207ENST00000533674 ARHGEF3Q9NR81 526 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.06□□□□□ -0.8
BEST3-207ENST00000533674 EPS15L1Q9UBC2 864 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 PPME1Q9Y570 386 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 IPPQ9Y573 584 aa10.06□□□□□ -0.8
BEST3-207ENST00000533674 CCDC194A0A1B0GVG4 234 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 KRBA1A5PL33 1030 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 ARL5CA6NH57 179 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 INO80B-WBP1J3KQ70 363 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 ASAP2O43150 1006 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 GAS2O43903 313 aaKnown RBP10.05□□□□□ -0.8
BEST3-207ENST00000533674 DEXIO95424 95 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 RPS6KB1P23443 525 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 AXLP30530 894 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 SCNN1GP51170 649 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 AFF1P51825 1210 aaKnown RBP10.05□□□□□ -0.8
BEST3-207ENST00000533674 EMC2Q15006 297 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 INF2Q27J81 1249 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 USP41Q3LFD5 358 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 XKR9Q5GH70 373 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 NCAPH2Q6IBW4 605 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 DCLRE1AQ6PJP8 1040 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 MOXD1Q6UVY6 613 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 TAS1R1Q7RTX1 841 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 KRT25Q7Z3Z0 450 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 ETNPPLQ8TBG4 499 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 HDAC7Q8WUI4 952 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 SHDQ96IW2 340 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 MYADMQ96S97 322 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 CEP89Q96ST8 783 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 GAD1Q99259 594 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.05□□□□□ -0.8
BEST3-207ENST00000533674 ZDHHC7Q9NXF8 308 aa10.05□□□□□ -0.8
BEST3-207ENST00000533674 CACNA1HO95180 2353 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 CYP3A7-CYP3A51PA0A087WV96 503 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 CCNT1O60563 726 aaKnown RBP10.04□□□□□ -0.8
BEST3-207ENST00000533674 KINO60870 393 aaKnown RBP10.04□□□□□ -0.8
BEST3-207ENST00000533674 LILRB3O75022 631 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 STBD1O95210 358 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 P4HBP07237 508 aaKnown RBP10.04□□□□□ -0.8
BEST3-207ENST00000533674 LAMP2P13473 410 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 CYP3A7P24462 503 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 PDIA3P30101 505 aaKnown RBP10.04□□□□□ -0.8
BEST3-207ENST00000533674 YWHABP31946 246 aaKnown RBP10.04□□□□□ -0.8
BEST3-207ENST00000533674 DSG1Q02413 1049 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 MXD4Q14582 209 aaPredicted RBP10.04□□□□□ -0.8
BEST3-207ENST00000533674 PCBP1Q15365 356 aaKnown RBP eCLIP10.04□□□□□ -0.8
BEST3-207ENST00000533674 NTRK3Q16288 839 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 UBXN11Q5T124 520 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 LIN9Q5TKA1 542 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 GALNT17Q6IS24 598 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 PHLDB3Q6NSJ2 640 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 C1orf210Q8IVY1 113 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 COLGALT2Q8IYK4 626 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 SMG8Q8ND04 991 aaKnown RBP10.04□□□□□ -0.8
BEST3-207ENST00000533674 RUBCNQ92622 972 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 RMDN1Q96DB5 314 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 CCDC51Q96ER9 411 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 CPB2Q96IY4 423 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 B3GALT6Q96L58 329 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 ZFP42Q96MM3 310 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 LXNQ9BS40 222 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 EIF2AQ9BY44 585 aaKnown RBP10.04□□□□□ -0.8
BEST3-207ENST00000533674 NT5C3AQ9H0P0 336 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 MINDY3Q9H8M7 445 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 MARCH5Q9NX47 278 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 NCDNQ9UBB6 729 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 POLIQ9UNA4 740 aa10.04□□□□□ -0.8
BEST3-207ENST00000533674 HES2Q9Y543 173 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms