RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 MAGED2Q9UNF1 606 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 PCDHA10Q9Y5I2 948 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 PITPNM2Q9BZ72 1349 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 PSMD14O00487 310 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 E2F6O75461 281 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 AARSP49588 968 aaKnown RBP eCLIP7.41□□□□□ -1.223e-6■□□□□ 10.9
CTNND1-236ENST00000533667 VSNL1P62760 191 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 KRT17Q04695 432 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 ZNF394Q53GI3 561 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 SNRNP48Q6IEG0 339 aaKnown RBP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 EEPD1Q7L9B9 569 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 ICA1LQ8NDH6 482 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 NCLNQ969V3 563 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 PPP1R2P1Q96PQ5 205 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 WDR24Q96S15 920 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 ACAD9Q9H845 621 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 TRIM45Q9H8W5 580 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 WDR70Q9NW82 654 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 LMCD1Q9NZU5 365 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 GABBR1Q9UBS5 961 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 AGO2Q9UKV8 859 aaKnown RBP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 ARHGAP26Q9UNA1 814 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 ESYT3A0FGR9 886 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 P4HA2O15460 535 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 TDP2O95551 362 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 MARK3P27448 753 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 SERPINB9P50453 376 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 E4F1Q66K89 784 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 RASSF3Q86WH2 238 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 APOBEC3FQ8IUX4 373 aaKnown RBP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 PASD1Q8IV76 773 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 GSPT2Q8IYD1 628 aaKnown RBP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 AGGF1Q8N302 714 aaeCLIP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 RIBC1Q8N443 379 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 MKNK1Q9BUB5 465 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 ASPSCR1Q9BZE9 553 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 KLC4Q9NSK0 619 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 APEX2Q9UBZ4 518 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 ALKQ9UM73 1620 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 APOL1O14791 398 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 NMT2O60551 498 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 CYP2C19P33261 490 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 RECQLP46063 649 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 MRPS25P82663 173 aaKnown RBP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 NCAPHQ15003 741 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 TBCCQ15814 346 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 DNAL1Q4LDG9 190 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 CEP55Q53EZ4 464 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 CCNI2Q6ZMN8 369 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 SH3TC2Q8TF17 1288 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 SLC10A4Q96EP9 437 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 FAM161BQ96MY7 647 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 PARVBQ9HBI1 364 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 SPHKAPQ2M3C7 1700 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 RASSF10A6NK89 507 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 SYCE1LA8MT33 242 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 H0Y3Z8 333 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 FCER1AP12319 257 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 SNAP25P60880 206 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 RGS9BPQ6ZS82 235 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 ATG9AQ7Z3C6 839 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 SRLQ86TD4 932 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 SP8Q8IXZ3 490 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 ITFG2Q969R8 447 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 TNIP3Q96KP6 325 aa7.41□□□□□ -1.22
CTNND1-236ENST00000533667 RAVER2Q9HCJ3 691 aaKnown RBP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 SCHIP1Q9P0W5 487 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 TTC7AQ9ULT0 858 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 RNF17Q9BXT8 1623 aaKnown RBP7.41□□□□□ -1.22
CTNND1-236ENST00000533667 TNS3Q68CZ2 1445 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 RNF103-CHMP3A0A140T963 221 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 ZBTB22O15209 634 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 EIF3DO15371 548 aaKnown RBP eCLIP7.4□□□□□ -1.22
CTNND1-236ENST00000533667 EIF3HO15372 352 aaKnown RBP eCLIP7.4□□□□□ -1.222e-7■■□□□ 12
CTNND1-236ENST00000533667 ECE2O60344 883 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 DIAPH2O60879 1101 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 DGAT1O75907 488 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 MMP10P09238 476 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 TYK2P29597 1187 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 ARSEP51690 589 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 ARPP19P56211 112 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 LAMB3Q13751 1172 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 NAB2Q15742 525 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 Q3C1V9 767 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 C4orf22Q6V702 233 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 FAM43BQ6ZT52 329 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-236ENST00000533667 STOX1Q6ZVD7 989 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 SRBD1Q8N5C6 995 aaKnown RBP7.4□□□□□ -1.22
CTNND1-236ENST00000533667 OR9Q1Q8NGQ5 310 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 SNX19Q92543 992 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 KRT35Q92764 455 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 ULK4Q96C45 1275 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 FAM84BQ96KN1 310 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-236ENST00000533667 LRRC1Q9BTT6 524 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 YIPF3Q9GZM5 350 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 FAM49AQ9H0Q0 323 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-236ENST00000533667 TEKT2Q9UIF3 430 aa7.4□□□□□ -1.22
CTNND1-236ENST00000533667 ARIH1Q9Y4X5 557 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-236ENST00000533667 ABCE1P61221 599 aaKnown RBP7.4□□□□□ -1.22
CTNND1-236ENST00000533667 UGP2Q16851 508 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms