RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 DDX19AQ9NUU7 478 aaKnown RBP13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 ADAM28Q9UKQ2 775 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 SORCS3Q9UPU3 1222 aa13.69□□□□□ -0.22
CAPRIN1-213ENST00000533562 K7ERI5 159 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 GLUD1P00367 558 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 THP07101 528 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 CREMQ03060 361 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 TUSC3Q13454 348 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 HSP90AA2PQ14568 343 aaPredicted RBP13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 DCAF4L1Q3SXM0 396 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 RILPL1Q5EBL4 403 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 FUT10Q6P4F1 479 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 CYP26C1Q6V0L0 522 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 CCDC149Q6ZUS6 474 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 OTOP3Q7RTS5 596 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 FBXL6Q8N531 539 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 CMASQ8NFW8 434 aaPredicted RBP13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 HDAC7Q8WUI4 952 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 ASIC4Q96FT7 647 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 GPR62Q9BZJ7 368 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 CCDC113Q9H0I3 377 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 SNTG2Q9NY99 539 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 LIMD1Q9UGP4 676 aa13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 TDRD15B5MCY1 1934 aaKnown RBP13.68□□□□□ -0.22
CAPRIN1-213ENST00000533562 SF3B1O75533 1304 aaKnown RBP eCLIP13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 CCDC195A0A1B0GUA6 201 aa13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 TTLL13PA6NNM8 815 aa13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 CCDC169A6NNP5 214 aa13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 F8W810 466 aa13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 H3BQV1 296 aa13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 MCM2P49736 904 aa13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 RIN2Q8WYP3 895 aaPredicted RBP13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 TMX3Q96JJ7 454 aa13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 PLEKHA4Q9H4M7 779 aa13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 POLD4Q9HCU8 107 aa13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 MAN1C1Q9NR34 630 aa13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 FNIP2Q9P278 1114 aa13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 KCNG1Q9UIX4 513 aa13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 CACNA1HO95180 2353 aa13.67□□□□□ -0.22
CAPRIN1-213ENST00000533562 PHLPP2Q6ZVD8 1323 aa13.66□□□□□ -0.22
CAPRIN1-213ENST00000533562 RECQL4O94761 1208 aa13.66□□□□□ -0.22
CAPRIN1-213ENST00000533562 ATF7IP2Q5U623 682 aa13.66□□□□□ -0.22
CAPRIN1-213ENST00000533562 PALB2Q86YC2 1186 aa13.66□□□□□ -0.22
CAPRIN1-213ENST00000533562 KCTD17Q8N5Z5 321 aa13.66□□□□□ -0.22
CAPRIN1-213ENST00000533562 RABGGTAQ92696 567 aa13.66□□□□□ -0.22
CAPRIN1-213ENST00000533562 STAMQ92783 540 aa13.66□□□□□ -0.22
CAPRIN1-213ENST00000533562 DRC1Q96MC2 740 aa13.66□□□□□ -0.22
CAPRIN1-213ENST00000533562 KIFC3Q9BVG8 833 aa13.66□□□□□ -0.22
CAPRIN1-213ENST00000533562 RHOBTB2Q9BYZ6 727 aa13.66□□□□□ -0.22
CAPRIN1-213ENST00000533562 C17orf75Q9HAS0 396 aa13.66□□□□□ -0.22
CAPRIN1-213ENST00000533562 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.66□□□□□ -0.22
CAPRIN1-213ENST00000533562 USP20Q9Y2K6 914 aa13.66□□□□□ -0.22
CAPRIN1-213ENST00000533562 RBM19Q9Y4C8 960 aaKnown RBP13.66□□□□□ -0.22
CAPRIN1-213ENST00000533562 CASTOR2A6NHX0 329 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 E9PMD0 336 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 PTGESO14684 152 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 BRD1O95696 1058 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 SPATA31D3P0C874 917 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 GJB2P29033 226 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 CDC25AP30304 524 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 NPTX2P47972 431 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 PEX3P56589 373 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 NHLH1Q02575 133 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 ELAVL2Q12926 359 aaKnown RBP13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 DMP1Q13316 513 aaPredicted RBP13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 IL17AQ16552 155 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 NT5DC1Q5TFE4 455 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 RINT1Q6NUQ1 792 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 SPATA31D4Q6ZUB0 917 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 B3GALT6Q96L58 329 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 TTPALQ9BTX7 342 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 TIPINQ9BVW5 301 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 TMEM134Q9H6X4 195 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 TNFSF13BQ9Y275 285 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 GDAQ9Y2T3 454 aa13.65□□□□□ -0.22
CAPRIN1-213ENST00000533562 PP2D1A8MPX8 630 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 TGM5O43548 720 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 HIP1RO75146 1068 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 ASGR2P07307 311 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 AVPR2P30518 371 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 YARSP54577 528 aaKnown RBP13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 PTPN5P54829 565 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 ATP2C1P98194 919 aaPredicted RBP13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 ZRSR1Q15695 479 aaKnown RBP13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 IER5LQ5T953 404 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 FAM171A1Q5VUB5 890 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 EEF1DP3Q658K8 133 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 ARL6IP4Q66PJ3 421 aaKnown RBP13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 PDXDC1Q6P996 788 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 LILRA6Q6PI73 481 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 C1orf186Q6ZWK4 172 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 CEP57Q86XR8 500 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 PAAF1Q9BRP4 392 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 TCHPQ9BT92 498 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 MRPL4Q9BYD3 311 aaKnown RBP13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 NT5C3AQ9H0P0 336 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 PIDD1Q9HB75 910 aa13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 WDR6Q9NNW5 1121 aaKnown RBP13.64□□□□□ -0.23
CAPRIN1-213ENST00000533562 KMT5AQ9NQR1 393 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms