RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 GDAQ9Y2T3 454 aa17■□□□□ 0.31
CPSF1-211ENST00000533492 TEX28O15482 410 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 EDN1P05305 212 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 PLA2G5P39877 138 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 NPTX2P47972 431 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 HSP90AA2PQ14568 343 aaPredicted RBP16.99■□□□□ 0.31
CPSF1-211ENST00000533492 NT5DC1Q5TFE4 455 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 ARL6IP4Q66PJ3 421 aaKnown RBP16.99■□□□□ 0.31
CPSF1-211ENST00000533492 TRIM67Q6ZTA4 783 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 HFE2Q6ZVN8 426 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 C1orf186Q6ZWK4 172 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 KCNK18Q7Z418 384 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 KCTD17Q8N5Z5 321 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 PLIN2Q99541 437 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 RUSC1Q9BVN2 902 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 TIPINQ9BVW5 301 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 GPR62Q9BZJ7 368 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 TMEM134Q9H6X4 195 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 C17orf75Q9HAS0 396 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 RXFP1Q9HBX9 757 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 KMT5AQ9NQR1 393 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.99■□□□□ 0.31
CPSF1-211ENST00000533492 CHST7Q9NS84 486 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 KCNG1Q9UIX4 513 aa16.99■□□□□ 0.31
CPSF1-211ENST00000533492 RBM19Q9Y4C8 960 aaKnown RBP16.99■□□□□ 0.31
CPSF1-211ENST00000533492 PHLPP2Q6ZVD8 1323 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 TMEM221A6NGB7 291 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 CASTOR2A6NHX0 329 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 C2CD4DB7Z1M9 353 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 M0R296 226 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 PTGESO14684 152 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 EFEMP2O95967 443 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 GLUD1P00367 558 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 PTPN21Q16825 1174 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 GPR149Q86SP6 731 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 RIN2Q8WYP3 895 aaPredicted RBP16.98■□□□□ 0.31
CPSF1-211ENST00000533492 PBXIP1Q96AQ6 731 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 B3GALT6Q96L58 329 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 MAN1C1Q9NR34 630 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 CACNG4Q9UBN1 327 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 TNFSF13BQ9Y275 285 aa16.98■□□□□ 0.31
CPSF1-211ENST00000533492 SF3B1O75533 1304 aaKnown RBP eCLIP16.97■□□□□ 0.31
CPSF1-211ENST00000533492 SFI1A8K8P3 1242 aa16.97■□□□□ 0.31
CPSF1-211ENST00000533492 SIGLEC14Q08ET2 396 aa16.97■□□□□ 0.31
CPSF1-211ENST00000533492 RAD51AP2Q09MP3 1159 aa16.97■□□□□ 0.31
CPSF1-211ENST00000533492 HYIQ5T013 277 aa16.97■□□□□ 0.31
CPSF1-211ENST00000533492 PALB2Q86YC2 1186 aa16.97■□□□□ 0.31
CPSF1-211ENST00000533492 GPR65Q8IYL9 337 aa16.97■□□□□ 0.31
CPSF1-211ENST00000533492 DAW1Q8N136 415 aa16.97■□□□□ 0.31
CPSF1-211ENST00000533492 PLCD3Q8N3E9 789 aa16.97■□□□□ 0.31
CPSF1-211ENST00000533492 SYT2Q8N9I0 419 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-211ENST00000533492 TDRD5Q8NAT2 981 aaKnown RBP16.97■□□□□ 0.31
CPSF1-211ENST00000533492 HASPINQ8TF76 798 aa16.97■□□□□ 0.31
CPSF1-211ENST00000533492 PNMA5Q96PV4 448 aa16.97■□□□□ 0.31
CPSF1-211ENST00000533492 ACO2Q99798 780 aaKnown RBP16.97■□□□□ 0.31
CPSF1-211ENST00000533492 PAAF1Q9BRP4 392 aa16.97■□□□□ 0.31
CPSF1-211ENST00000533492 TCHPQ9BT92 498 aa16.97■□□□□ 0.31
CPSF1-211ENST00000533492 CCDC94Q9BW85 323 aaPredicted RBP16.97■□□□□ 0.31
CPSF1-211ENST00000533492 MRPL4Q9BYD3 311 aaKnown RBP16.97■□□□□ 0.31
CPSF1-211ENST00000533492 USTQ9Y2C2 406 aa16.97■□□□□ 0.31
CPSF1-211ENST00000533492 MYO10Q9HD67 2058 aa16.97■□□□□ 0.31
CPSF1-211ENST00000533492 TECTAO75443 2155 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 CCDC195A0A1B0GUA6 201 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 BMP15O95972 392 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 PLA2G4BP0C869 781 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 MYBP10242 640 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 GUCY2CP25092 1073 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 UBA7P41226 1012 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 SMTNP53814 917 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 YARSP54577 528 aaKnown RBP16.96■□□□□ 0.31
CPSF1-211ENST00000533492 CREMQ03060 361 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 STRN3Q13033 797 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 FAM171A1Q5VUB5 890 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 C15orf39Q6ZRI6 1047 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 CCDC149Q6ZUS6 474 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 BRAPQ7Z569 592 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 BMP8AQ7Z5Y6 402 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 CEP57Q86XR8 500 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 GLYCTKQ8IVS8 523 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 ACSF2Q96CM8 615 aaPredicted RBP16.96■□□□□ 0.31
CPSF1-211ENST00000533492 CALML4Q96GE6 196 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 AK8Q96MA6 479 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 CXCL16Q9H2A7 254 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 FNIP2Q9P278 1114 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 ARHGAP28Q9P2N2 729 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 TRIOO75962 3097 aa16.96■□□□□ 0.31
CPSF1-211ENST00000533492 SLC16A4O15374 487 aa16.95■□□□□ 0.3
CPSF1-211ENST00000533492 KIF4AO95239 1232 aa16.95■□□□□ 0.3
CPSF1-211ENST00000533492 SPATA31D3P0C874 917 aa16.95■□□□□ 0.3
CPSF1-211ENST00000533492 PDCP20941 246 aa16.95■□□□□ 0.3
CPSF1-211ENST00000533492 ELAVL2Q12926 359 aaKnown RBP16.95■□□□□ 0.3
CPSF1-211ENST00000533492 MAPK7Q13164 816 aa16.95■□□□□ 0.3
CPSF1-211ENST00000533492 ZNF568Q3ZCX4 644 aa16.95■□□□□ 0.3
CPSF1-211ENST00000533492 GLRA4Q5JXX5 417 aa16.95■□□□□ 0.3
CPSF1-211ENST00000533492 SPATA31D4Q6ZUB0 917 aa16.95■□□□□ 0.3
CPSF1-211ENST00000533492 OTOP3Q7RTS5 596 aa16.95■□□□□ 0.3
CPSF1-211ENST00000533492 SUGP1Q8IWZ8 645 aaKnown RBP16.95■□□□□ 0.3
CPSF1-211ENST00000533492 ZDHHC14Q8IZN3 488 aa16.95■□□□□ 0.3
CPSF1-211ENST00000533492 KREMEN2Q8NCW0 462 aa16.95■□□□□ 0.3
CPSF1-211ENST00000533492 HDAC7Q8WUI4 952 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms