RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 DNAJB4Q9UDY4 337 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 PRG3Q9Y2Y8 225 aaPredicted RBP12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 TRIP11Q15643 1979 aa12.58□□□□□ -0.4
UBASH3B-208ENST00000533451 CITO14578 2027 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 MYMKA6NI61 221 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 NR1I2O75469 434 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 RECQL4O94761 1208 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 DNAJB1P25685 340 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 NMT1P30419 496 aaKnown RBP12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 OR1G1P47890 313 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 SLC11A1P49279 550 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 AFF1P51825 1210 aaKnown RBP12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 NCKAP1LP55160 1127 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 ASIC1P78348 528 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 NUCB2P80303 420 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 AXDND1Q5T1B0 1012 aaPredicted RBP12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 PLPP4Q5VZY2 271 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 TAS1R3Q7RTX0 852 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 RBM23Q86U06 439 aaKnown RBP12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 ZNF280BQ86YH2 543 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 LEO1Q8WVC0 666 aaPredicted RBP12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 ACO2Q99798 780 aaKnown RBP12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 TCF25Q9BQ70 676 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 CCDC94Q9BW85 323 aaPredicted RBP12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 LRRC27Q9C0I9 530 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 CDT1Q9H211 546 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 NRDE2Q9H7Z3 1164 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 MRPL44Q9H9J2 332 aaKnown RBP12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 TNFSF13BQ9Y275 285 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 GIT1Q9Y2X7 761 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 PCDHGC5Q9Y5F6 944 aa12.57□□□□□ -0.4
UBASH3B-208ENST00000533451 POLR2DO15514 142 aaKnown RBP12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 GAP43P17677 238 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 IRS1P35568 1242 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 UBE3AQ05086 875 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 GRIK3Q13003 919 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 BMS1Q14692 1282 aaKnown RBP12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 NOLC1Q14978 699 aaKnown RBP eCLIP12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 HERC4Q5GLZ8 1057 aaPredicted RBP12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 GLRA4Q5JXX5 417 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 RESP18Q5W5W9 173 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 MPZL3Q6UWV2 235 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 TMC7Q7Z402 723 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 CEP57L1Q8IYX8 460 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 SLC39A11Q8N1S5 342 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 MRPS27Q92552 414 aaKnown RBP12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 HLA-CQ95604 372 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 SCAND2PQ9GZW5 306 aaPredicted RBP12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 GDPD2Q9HCC8 539 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 TOPORSQ9NS56 1045 aaPredicted RBP12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 PANK4Q9NVE7 773 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 CLDND1Q9NY35 253 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 RCOR1Q9UKL0 485 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 FAN1Q9Y2M0 1017 aa12.56□□□□□ -0.4
UBASH3B-208ENST00000533451 COL6A3P12111 3177 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 CARNS1A5YM72 827 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 GOLGA6L4A6NEF3 574 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 CLDN3O15551 220 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 B4GALT3O60512 393 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 TOM1L1O75674 476 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 DDHD2O94830 711 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 GCNT3O95395 438 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 ALDH2P05091 517 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 GALTP07902 379 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 MCF2P10911 925 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 AFMP43652 599 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 NRIP1P48552 1158 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 ZNF131P52739 623 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 EMP3P54852 163 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 AMPD3Q01432 767 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 TFF2Q03403 129 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 SEZ6Q53EL9 994 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 ZC2HC1CQ53FD0 456 aaPredicted RBP12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 TMEM173Q86WV6 379 aaPredicted RBP12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 CCDC65Q8IXS2 484 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 CEP120Q8N960 986 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 RABGGTAQ92696 567 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 ZBTB45Q96K62 511 aaPredicted RBP12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 TMEM175Q9BSA9 504 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 NTPCRQ9BSD7 190 aaKnown RBP12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 TNMDQ9H2S6 317 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 CUEDC2Q9H467 287 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 TLE6Q9H808 572 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 RYDENQ9NUL5 291 aaKnown RBP12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 MIOSQ9NXC5 875 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 KCNH3Q9ULD8 1083 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 TBX20Q9UMR3 447 aa12.55□□□□□ -0.4
UBASH3B-208ENST00000533451 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.54□□□□□ -0.4
UBASH3B-208ENST00000533451 A0A1B0GVL5 298 aa12.54□□□□□ -0.4
UBASH3B-208ENST00000533451 C2orf72A6NCS6 295 aa12.54□□□□□ -0.4
UBASH3B-208ENST00000533451 CASTOR2A6NHX0 329 aa12.54□□□□□ -0.4
UBASH3B-208ENST00000533451 PFKFB1P16118 471 aa12.54□□□□□ -0.4
UBASH3B-208ENST00000533451 KCNA5P22460 613 aa12.54□□□□□ -0.4
UBASH3B-208ENST00000533451 ABCD1P33897 745 aa12.54□□□□□ -0.4
UBASH3B-208ENST00000533451 GRM5P41594 1212 aa12.54□□□□□ -0.4
UBASH3B-208ENST00000533451 ERVFC1P60507 584 aa12.54□□□□□ -0.4
UBASH3B-208ENST00000533451 PLCB3Q01970 1234 aa12.54□□□□□ -0.4
UBASH3B-208ENST00000533451 CAMK1Q14012 370 aa12.54□□□□□ -0.4
UBASH3B-208ENST00000533451 SMC1AQ14683 1233 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms