RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 SEMA3AQ14563 771 aa5.83□□□□□ -1.48
CKAP5-212ENST00000533413 ARSHQ5FYA8 562 aa5.83□□□□□ -1.48
CKAP5-212ENST00000533413 EARS2Q5JPH6 523 aaKnown RBP5.83□□□□□ -1.48
CKAP5-212ENST00000533413 MZT2BQ6NZ67 158 aa5.83□□□□□ -1.48
CKAP5-212ENST00000533413 ARMC9Q7Z3E5 817 aa5.83□□□□□ -1.48
CKAP5-212ENST00000533413 THNSL2Q86YJ6 484 aa5.83□□□□□ -1.48
CKAP5-212ENST00000533413 FAM114A1Q8IWE2 563 aa5.83□□□□□ -1.48
CKAP5-212ENST00000533413 TRIM42Q8IWZ5 723 aa5.83□□□□□ -1.48
CKAP5-212ENST00000533413 TRIM58Q8NG06 486 aa5.83□□□□□ -1.48
CKAP5-212ENST00000533413 PXYLP1Q8TE99 480 aa5.83□□□□□ -1.48
CKAP5-212ENST00000533413 NSUN4Q96CB9 384 aaKnown RBP5.83□□□□□ -1.48
CKAP5-212ENST00000533413 CEP95Q96GE4 821 aa5.83□□□□□ -1.48
CKAP5-212ENST00000533413 ALS2CR12Q96Q35 445 aa5.83□□□□□ -1.48
CKAP5-212ENST00000533413 ZSCAN10Q96SZ4 725 aaPredicted RBP5.83□□□□□ -1.48
CKAP5-212ENST00000533413 NTPCRQ9BSD7 190 aaKnown RBP5.83□□□□□ -1.48
CKAP5-212ENST00000533413 IDI2Q9BXS1 227 aa5.83□□□□□ -1.48
CKAP5-212ENST00000533413 THAP9Q9H5L6 903 aa5.83□□□□□ -1.48
CKAP5-212ENST00000533413 NHEJ1Q9H9Q4 299 aaPredicted RBP5.83□□□□□ -1.48
CKAP5-212ENST00000533413 CPSF2Q9P2I0 782 aaKnown RBP5.83□□□□□ -1.48
CKAP5-212ENST00000533413 GRIN2DO15399 1336 aa5.83□□□□□ -1.48
CKAP5-212ENST00000533413 MYH1P12882 1939 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 B4DLN1 442 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 F5H423 210 aaPredicted RBP5.82□□□□□ -1.48
CKAP5-212ENST00000533413 NDUFAB1O14561 156 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 ZNF185O15231 689 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 MUTP22033 750 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 LONP1P36776 959 aaKnown RBP5.82□□□□□ -1.48
CKAP5-212ENST00000533413 HADHAP40939 763 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 DRP2Q13474 957 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 DCAF15Q66K64 600 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 ARHGEF18Q6ZSZ5 1173 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 MICALCLQ6ZW33 695 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 MFN1Q8IWA4 741 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 CSGALNACT2Q8N6G5 542 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 IPMKQ8NFU5 416 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 NSUN6Q8TEA1 469 aaKnown RBP5.82□□□□□ -1.48
CKAP5-212ENST00000533413 TBC1D5Q92609 795 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 THAP11Q96EK4 314 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 GLIS2Q9BZE0 524 aaPredicted RBP5.82□□□□□ -1.48
CKAP5-212ENST00000533413 GBA2Q9HCG7 927 aaPredicted RBP5.82□□□□□ -1.48
CKAP5-212ENST00000533413 STARD7Q9NQZ5 370 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 DDX20Q9UHI6 824 aaKnown RBP5.82□□□□□ -1.48
CKAP5-212ENST00000533413 TFR2Q9UP52 801 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 DAGLAQ9Y4D2 1042 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 TRIM49BA6NDI0 452 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 PPP1R12BO60237 982 aaPredicted RBP5.82□□□□□ -1.48
CKAP5-212ENST00000533413 CELF2O95319 508 aaKnown RBP5.82□□□□□ -1.48
CKAP5-212ENST00000533413 PLEKHA8P1O95397 391 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 ASMTLO95671 621 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 GRK2P25098 689 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 PRDX5P30044 214 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 HOXD12P35452 270 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 POLD2P49005 469 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 ALS2CLQ60I27 953 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 APOBEC3HQ6NTF7 200 aaKnown RBP5.82□□□□□ -1.48
CKAP5-212ENST00000533413 DTHD1Q6ZMT9 781 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 FAM228AQ86W67 206 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 CCDC50Q8IVM0 306 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 ADSSL1Q8N142 457 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 MMGT1Q8N4V1 131 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 TEX9Q8N6V9 391 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 EFCAB3Q8N7B9 438 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 LSMEM1Q8N8F7 131 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 C3orf20Q8ND61 904 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 GOT1L1Q8NHS2 421 aaPredicted RBP5.82□□□□□ -1.48
CKAP5-212ENST00000533413 FAM151AQ8WW52 585 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 RUBCNQ92622 972 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 KLRG1Q96E93 195 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 RSRC1Q96IZ7 334 aaKnown RBP5.82□□□□□ -1.48
CKAP5-212ENST00000533413 TSGA13Q96PP4 275 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 HINFPQ9BQA5 517 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 TUBGCP2Q9BSJ2 902 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 TACC3Q9Y6A5 838 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 ATAD5Q96QE3 1844 aa5.82□□□□□ -1.48
CKAP5-212ENST00000533413 ATRNL1Q5VV63 1379 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 MAGEB6P1A0A0J9YX57 407 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 SRRM3A6NNA2 597 aaPredicted RBP5.81□□□□□ -1.48
CKAP5-212ENST00000533413 AGPSO00116 658 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 EIF3HO15372 352 aaKnown RBP eCLIP5.81□□□□□ -1.48
CKAP5-212ENST00000533413 SART1O43290 800 aaKnown RBP5.81□□□□□ -1.48
CKAP5-212ENST00000533413 EGFRP00533 1210 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 TCP1P17987 556 aaKnown RBP5.81□□□□□ -1.48
CKAP5-212ENST00000533413 CALML3P27482 149 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 CAP2P40123 477 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 VAV2P52735 878 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 EPHB4P54760 987 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 CYP27A1Q02318 531 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 ITIH3Q06033 890 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 ITKQ08881 620 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 FAPQ12884 760 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 RAB33AQ14088 237 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 EMC10Q5UCC4 262 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 ARL6IP4Q66PJ3 421 aaKnown RBP5.81□□□□□ -1.48
CKAP5-212ENST00000533413 IGF2-ASQ6U949 168 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 C16orf86Q6ZW13 317 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 GALNT13Q8IUC8 556 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 CLIP3Q96DZ5 547 aa5.81□□□□□ -1.48
CKAP5-212ENST00000533413 PRMT6Q96LA8 375 aaPredicted RBP5.81□□□□□ -1.48
CKAP5-212ENST00000533413 GPATCH1Q9BRR8 931 aaKnown RBP5.81□□□□□ -1.48
CKAP5-212ENST00000533413 NOC4LQ9BVI4 516 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms