RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 TMEM169Q96HH4 297 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 RPS6KC1Q96S38 1066 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 PYM1Q9BRP8 204 aaKnown RBP22.4■■□□□ 1.18
CCS-208ENST00000533244 TRIM9Q9C026 710 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 HAPLN2Q9GZV7 340 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 CXCL16Q9H2A7 254 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 KCNH3Q9ULD8 1083 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 COG5Q9UP83 839 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 HPSEQ9Y251 543 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 GDAQ9Y2T3 454 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 FAM237AA0A1B0GTK4 181 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 NRP1O14786 923 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 ALDH2P05091 517 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 HYAL1Q12794 435 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 NOLC1Q14978 699 aaKnown RBP eCLIP22.4■■□□□ 1.18
CCS-208ENST00000533244 NAB2Q15742 525 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 XKR4Q5GH76 650 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 ZBTB33Q86T24 672 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 HVCN1Q96D96 273 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 MARCH5Q9NX47 278 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 PCDHGC5Q9Y5F6 944 aa22.4■■□□□ 1.18
CCS-208ENST00000533244 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.39■■□□□ 1.17
CCS-208ENST00000533244 CSPG5O95196 566 aa22.39■■□□□ 1.17
CCS-208ENST00000533244 EFEMP2O95967 443 aa22.39■■□□□ 1.17
CCS-208ENST00000533244 ZC2HC1CQ53FD0 456 aaPredicted RBP22.39■■□□□ 1.17
CCS-208ENST00000533244 SLC39A4Q6P5W5 647 aa22.39■■□□□ 1.17
CCS-208ENST00000533244 ALKAL1Q6UXT8 129 aa22.39■■□□□ 1.17
CCS-208ENST00000533244 ADGRD2Q7Z7M1 963 aa22.39■■□□□ 1.17
CCS-208ENST00000533244 DDX53Q86TM3 631 aaKnown RBP22.39■■□□□ 1.17
CCS-208ENST00000533244 ATXN2LQ8WWM7 1075 aaKnown RBP22.39■■□□□ 1.17
CCS-208ENST00000533244 HLA-CQ95604 372 aa22.39■■□□□ 1.17
CCS-208ENST00000533244 C7orf25Q9BPX7 421 aa22.39■■□□□ 1.17
CCS-208ENST00000533244 TCHPQ9BT92 498 aa22.39■■□□□ 1.17
CCS-208ENST00000533244 CCDC94Q9BW85 323 aaPredicted RBP22.39■■□□□ 1.17
CCS-208ENST00000533244 VN1R3Q9BXE9 311 aa22.39■■□□□ 1.17
CCS-208ENST00000533244 ANKFY1Q9P2R3 1169 aa22.39■■□□□ 1.17
CCS-208ENST00000533244 FAN1Q9Y2M0 1017 aa22.39■■□□□ 1.17
CCS-208ENST00000533244 HNRNPDLO14979 420 aaKnown RBP22.38■■□□□ 1.17
CCS-208ENST00000533244 CLDN3O15551 220 aa22.38■■□□□ 1.17
CCS-208ENST00000533244 IDEP14735 1019 aa22.38■■□□□ 1.17
CCS-208ENST00000533244 PFKFB1P16118 471 aa22.38■■□□□ 1.17
CCS-208ENST00000533244 AMPD3Q01432 767 aa22.38■■□□□ 1.17
CCS-208ENST00000533244 CTC1Q2NKJ3 1217 aa22.38■■□□□ 1.17
CCS-208ENST00000533244 PABPC5Q96DU9 382 aaKnown RBP22.38■■□□□ 1.17
CCS-208ENST00000533244 BICD1Q96G01 975 aa22.38■■□□□ 1.17
CCS-208ENST00000533244 TCF25Q9BQ70 676 aa22.38■■□□□ 1.17
CCS-208ENST00000533244 ZBP1Q9H171 429 aa22.38■■□□□ 1.17
CCS-208ENST00000533244 NGRNQ9NPE2 291 aaKnown RBP22.38■■□□□ 1.17
CCS-208ENST00000533244 PANK4Q9NVE7 773 aa22.38■■□□□ 1.17
CCS-208ENST00000533244 A0A1W2PQ27 194 aa22.37■■□□□ 1.17
CCS-208ENST00000533244 A0A1W2PQ64 194 aa22.37■■□□□ 1.17
CCS-208ENST00000533244 A0A1W2PQD8 194 aa22.37■■□□□ 1.17
CCS-208ENST00000533244 MEFVO15553 781 aaPredicted RBP22.37■■□□□ 1.17
CCS-208ENST00000533244 NCK2O43639 380 aa22.37■■□□□ 1.17
CCS-208ENST00000533244 ACTN4O43707 911 aaKnown RBP22.37■■□□□ 1.17
CCS-208ENST00000533244 FAM189A1O60320 539 aa22.37■■□□□ 1.17
CCS-208ENST00000533244 THP07101 528 aa22.37■■□□□ 1.17
CCS-208ENST00000533244 LIG4P49917 911 aa22.37■■□□□ 1.17
CCS-208ENST00000533244 TUSC3Q13454 348 aa22.37■■□□□ 1.17
CCS-208ENST00000533244 HERC4Q5GLZ8 1057 aaPredicted RBP22.37■■□□□ 1.17
CCS-208ENST00000533244 CCDC65Q8IXS2 484 aa22.37■■□□□ 1.17
CCS-208ENST00000533244 RNF168Q8IYW5 571 aaPredicted RBP22.37■■□□□ 1.17
CCS-208ENST00000533244 PPP2R3CQ969Q6 453 aa22.37■■□□□ 1.17
CCS-208ENST00000533244 SNX27Q96L92 541 aa22.37■■□□□ 1.17
CCS-208ENST00000533244 PPP1R10Q96QC0 940 aaKnown RBP22.37■■□□□ 1.17
CCS-208ENST00000533244 UBE2ZQ9H832 354 aaPredicted RBP22.37■■□□□ 1.17
CCS-208ENST00000533244 MRPL44Q9H9J2 332 aaKnown RBP22.37■■□□□ 1.17
CCS-208ENST00000533244 TOPORSQ9NS56 1045 aaPredicted RBP22.37■■□□□ 1.17
CCS-208ENST00000533244 STK39Q9UEW8 545 aa22.37■■□□□ 1.17
CCS-208ENST00000533244 TRIP11Q15643 1979 aa22.37■■□□□ 1.17
CCS-208ENST00000533244 A0A1B0GVL5 298 aa22.36■■□□□ 1.17
CCS-208ENST00000533244 CITO14578 2027 aa22.36■■□□□ 1.17
CCS-208ENST00000533244 SLFN14P0C7P3 912 aa22.36■■□□□ 1.17
CCS-208ENST00000533244 OR1G1P47890 313 aa22.36■■□□□ 1.17
CCS-208ENST00000533244 CASP5P51878 434 aa22.36■■□□□ 1.17
CCS-208ENST00000533244 COASYQ13057 564 aa22.36■■□□□ 1.17
CCS-208ENST00000533244 ACAP3Q96P50 834 aa22.36■■□□□ 1.17
CCS-208ENST00000533244 GDPD2Q9HCC8 539 aa22.36■■□□□ 1.17
CCS-208ENST00000533244 ENTPD7Q9NQZ7 604 aa22.36■■□□□ 1.17
CCS-208ENST00000533244 CIZ1Q9ULV3 898 aaPredicted RBP22.36■■□□□ 1.17
CCS-208ENST00000533244 PRG3Q9Y2Y8 225 aaPredicted RBP22.36■■□□□ 1.17
CCS-208ENST00000533244 STYXL1Q9Y6J8 313 aa22.36■■□□□ 1.17
CCS-208ENST00000533244 A0A0C4DFX4 3053 aa22.36■■□□□ 1.17
CCS-208ENST00000533244 A0A0B4J269 797 aa22.35■■□□□ 1.17
CCS-208ENST00000533244 HARSP12081 509 aaKnown RBP22.35■■□□□ 1.17
CCS-208ENST00000533244 GTF2F1P35269 517 aaKnown RBP eCLIP22.35■■□□□ 1.17
CCS-208ENST00000533244 YARSP54577 528 aaKnown RBP22.35■■□□□ 1.17
CCS-208ENST00000533244 OSTNP61366 133 aa22.35■■□□□ 1.17
CCS-208ENST00000533244 TFF2Q03403 129 aa22.35■■□□□ 1.17
CCS-208ENST00000533244 EHHADHQ08426 723 aa22.35■■□□□ 1.17
CCS-208ENST00000533244 ALCAMQ13740 583 aa22.35■■□□□ 1.17
CCS-208ENST00000533244 L1TD1Q5T7N2 865 aaKnown RBP22.35■■□□□ 1.17
CCS-208ENST00000533244 PLPP4Q5VZY2 271 aa22.35■■□□□ 1.17
CCS-208ENST00000533244 TMC7Q7Z402 723 aa22.35■■□□□ 1.17
CCS-208ENST00000533244 VPS52Q8N1B4 723 aa22.35■■□□□ 1.17
CCS-208ENST00000533244 MICAL1Q8TDZ2 1067 aa22.35■■□□□ 1.17
CCS-208ENST00000533244 FGFBP2Q9BYJ0 223 aa22.35■■□□□ 1.17
CCS-208ENST00000533244 TBC1D7Q9P0N9 293 aa22.35■■□□□ 1.17
CCS-208ENST00000533244 CNTN3Q9P232 1028 aa22.35■■□□□ 1.17
CCS-208ENST00000533244 USP25Q9UHP3 1055 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms