RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 ITGA8P53708 1063 aa10.02□□□□□ -0.8
BDNF-216ENST00000532997 ADCY1Q08828 1119 aa10.02□□□□□ -0.8
BDNF-216ENST00000532997 SLC15A2Q16348 729 aa10.02□□□□□ -0.8
BDNF-216ENST00000532997 KYNUQ16719 465 aa10.02□□□□□ -0.8
BDNF-216ENST00000532997 CEP55Q53EZ4 464 aa10.02□□□□□ -0.8
BDNF-216ENST00000532997 XKR9Q5GH70 373 aa10.02□□□□□ -0.8
BDNF-216ENST00000532997 POMGNT1Q8WZA1 660 aa10.02□□□□□ -0.8
BDNF-216ENST00000532997 MRRFQ96E11 262 aaKnown RBP10.02□□□□□ -0.8
BDNF-216ENST00000532997 TOGARAM1Q9Y4F4 1720 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 FRMPD4Q14CM0 1322 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 DCDC2CA8MYV0 355 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 ZWINTO95229 277 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 P4HBP07237 508 aaKnown RBP10.02□□□□□ -0.81
BDNF-216ENST00000532997 VCAM1P19320 739 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 SCP2P22307 547 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 CIITAP33076 1130 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 SNAP25P60880 206 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 LLGL1Q15334 1064 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 FAM196AQ6ZSG2 479 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 MCF2L2Q86YR7 1114 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 CKAP2Q8WWK9 683 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 ART4Q93070 314 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 RNF25Q96BH1 459 aaPredicted RBP10.02□□□□□ -0.81
BDNF-216ENST00000532997 ABCF3Q9NUQ8 709 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 PCDHA3Q9Y5H8 950 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 I3L4J1 428 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 OPLAHO14841 1288 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 GDF11O95390 407 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 ATF7P17544 494 aaPredicted RBP10.02□□□□□ -0.81
BDNF-216ENST00000532997 ECHS1P30084 290 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 SKIV2L2P42285 1042 aaKnown RBP10.02□□□□□ -0.81
BDNF-216ENST00000532997 CRKP46108 304 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 GRIK5Q16478 980 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 TRIM72Q6ZMU5 477 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 FAM160B2Q86V87 743 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 KIF2BQ8N4N8 673 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 FBXL13Q8NEE6 735 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.02□□□□□ -0.81
BDNF-216ENST00000532997 ETNPPLQ8TBG4 499 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 CRAMP1Q96RY5 1269 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 SLC24A3Q9HC58 644 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 HSPBP1Q9NZL4 362 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 COL14A1Q05707 1796 aaKnown RBP10.02□□□□□ -0.81
BDNF-216ENST00000532997 MYH4Q9Y623 1939 aa10.02□□□□□ -0.81
BDNF-216ENST00000532997 TNNI1P19237 187 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 SHMT1P34896 483 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 ALDH5A1P51649 535 aaPredicted RBP10.01□□□□□ -0.81
BDNF-216ENST00000532997 RAD23BP54727 409 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 DOK7Q18PE1 504 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 LGSNQ5TDP6 509 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 ZNF449Q6P9G9 518 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 SLC9A9Q8IVB4 645 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 PALM2Q8IXS6 379 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 NUDCD1Q96RS6 583 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 SIX2Q9NPC8 291 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 ZDHHC18Q9NUE0 388 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 ZFP69BQ9UJL9 534 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 ACTL7BQ9Y614 415 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 MAST2Q6P0Q8 1798 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 MYH7BA7E2Y1 1941 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 SPATA31A5Q5VU36 1347 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 SPATA31A7Q8IWB4 1347 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 SMIM24O75264 130 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 TJP3O95049 919 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 NDUFB10O96000 172 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 IFNB1P01574 187 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 SH3BGRP55822 239 aaPredicted RBP10.01□□□□□ -0.81
BDNF-216ENST00000532997 SLC30A5Q8TAD4 765 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 PPP1R14CQ8TAE6 165 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 SLC20A1Q8WUM9 679 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 TRABDQ9H4I3 376 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 HOMER2Q9NSB8 354 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.01□□□□□ -0.81
BDNF-216ENST00000532997 SCOCQ9UIL1 159 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 SLC12A4Q9UP95 1085 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 NAV1Q8NEY1 1877 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 IPO5O00410 1097 aaKnown RBP10.01□□□□□ -0.81
BDNF-216ENST00000532997 PPP1R12AO14974 1030 aaPredicted RBP10.01□□□□□ -0.81
BDNF-216ENST00000532997 TOM1O60784 492 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 CYP3A4P08684 503 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 SPATA31C1P0DKV0 1188 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 MAPTP10636 758 aaKnown RBP10.01□□□□□ -0.81
BDNF-216ENST00000532997 PLS3P13797 630 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 UBXN2AP68543 259 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 MRPS35P82673 323 aaKnown RBP10.01□□□□□ -0.81
BDNF-216ENST00000532997 CDR2Q01850 454 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 TMEM132AQ24JP5 1023 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 ACAD10Q6JQN1 1059 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 CDC42EP5Q6NZY7 148 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 HAUS6Q7Z4H7 955 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 KIAA0825Q8IV33 1275 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 TRIM42Q8IWZ5 723 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 SP8Q8IXZ3 490 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 ALG3Q92685 438 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 ERP27Q96DN0 273 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 MBOAT7Q96N66 472 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 ZNF317Q96PQ6 595 aaPredicted RBP10.01□□□□□ -0.81
BDNF-216ENST00000532997 PPP1R12CQ9BZL4 782 aa10.01□□□□□ -0.81
BDNF-216ENST00000532997 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.01□□□□□ -0.81
BDNF-216ENST00000532997 E7ENQ6 273 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms