RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 NBPF12Q5TAG4 269 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-232ENST00000532649 TBC1D19Q8N5T2 526 aa9.27□□□□□ -0.93
CTNND1-232ENST00000532649 PBXIP1Q96AQ6 731 aa9.27□□□□□ -0.93
CTNND1-232ENST00000532649 AP1M1Q9BXS5 423 aa9.27□□□□□ -0.93
CTNND1-232ENST00000532649 ZDHHC9Q9Y397 364 aa9.27□□□□□ -0.93
CTNND1-232ENST00000532649 NPM3O75607 178 aaKnown RBP9.26□□□□□ -0.93
CTNND1-232ENST00000532649 KCNA1Q09470 495 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 RPAINQ86UA6 219 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 GBA2Q9HCG7 927 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-232ENST00000532649 KCNH7Q9NS40 1196 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 ASNSD1Q9NWL6 643 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 CAPN11Q9UMQ6 739 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 REREQ9P2R6 1566 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 VGLL3A8MV65 326 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 CAPZA2P47755 286 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 AP3M2P53677 418 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 BACE1P56817 501 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 GPC5P78333 572 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 GFPT1Q06210 699 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-232ENST00000532649 KCNB1Q14721 858 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 IER5Q5VY09 327 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 BZW1Q7L1Q6 419 aaKnown RBP9.26□□□□□ -0.93
CTNND1-232ENST00000532649 DONSONQ9NYP3 566 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 KIF17Q9P2E2 1029 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 DDTLA6NHG4 134 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-232ENST00000532649 PDXKO00764 312 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 MAGEB2O15479 319 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 KCNJ6P48051 423 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 ATP1A2P50993 1020 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 PAPOLAP51003 745 aaKnown RBP9.26□□□□□ -0.93
CTNND1-232ENST00000532649 DGKDQ16760 1214 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 ZNF746Q6NUN9 644 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-232ENST00000532649 CCHCR1Q8TD31 782 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 HSPBP1Q9NZL4 362 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 RNF14Q9UBS8 474 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 DOLKQ9UPQ8 538 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 KIF1AQ12756 1690 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 PYGBP11216 843 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 ACOT2P49753 483 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 GNASQ5JWF2 1037 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 ANKRD40Q6AI12 368 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 SARM1Q6SZW1 724 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 METTL16Q86W50 562 aaKnown RBP9.26□□□□□ -0.93
CTNND1-232ENST00000532649 TAGAPQ8N103 731 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 MTBPQ96DY7 904 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 OTUB1Q96FW1 271 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-232ENST00000532649 EDEM3Q9BZQ6 932 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 COL3A1P02461 1466 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-232ENST00000532649 TOM1L1O75674 476 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 KRT8P05787 483 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 PLS3P13797 630 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 E4F1Q66K89 784 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-232ENST00000532649 TTC39CQ8N584 583 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 PPP2R3CQ969Q6 453 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 ERAP1Q9NZ08 941 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 ATP8A1Q9Y2Q0 1164 aa9.26□□□□□ -0.93
CTNND1-232ENST00000532649 CA4P22748 312 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 SDC4P31431 198 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 SSTR3P32745 418 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-232ENST00000532649 PSMC1P62191 440 aaKnown RBP9.25□□□□□ -0.93
CTNND1-232ENST00000532649 SEMA3FQ13275 785 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 HABP4Q5JVS0 413 aaKnown RBP9.25□□□□□ -0.93
CTNND1-232ENST00000532649 FRMD5Q7Z6J6 570 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 LRRC71Q8N4P6 559 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 SLC26A7Q8TE54 656 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 RABGGTAQ92696 567 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 RIT2Q99578 217 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 DNAJC7Q99615 494 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 RPS6KA5O75582 802 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 PALMO75781 387 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 UPP2O95045 317 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 TJP3O95049 919 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 RFC5P40937 340 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 MMP14P50281 582 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 CPT1AP50416 773 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 VCPP55072 806 aaKnown RBP9.25□□□□□ -0.93
CTNND1-232ENST00000532649 ARID5BQ14865 1188 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 ADGRA1Q86SQ6 560 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 TMCO5AQ8N6Q1 288 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 SERPINI1Q99574 410 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 MAP3K20Q9NYL2 800 aaKnown RBP9.25□□□□□ -0.93
CTNND1-232ENST00000532649 SUN2Q9UH99 717 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 KRT87PA6NCN2 255 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 PLSCR1O15162 318 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 EIF3DO15371 548 aaKnown RBP eCLIP9.25□□□□□ -0.93
CTNND1-232ENST00000532649 CYP2C9P11712 490 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 DDR1Q08345 913 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 XRRA1Q6P2D8 792 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 LRRC31Q6UY01 552 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 AKT1S1Q96B36 256 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 ZFP42Q96MM3 310 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 RRAGCQ9HB90 399 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 STAP1Q9ULZ2 295 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 MYO1DO94832 1006 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 FGGP02679 453 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 VEGFAP15692 232 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-232ENST00000532649 DR1Q01658 176 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 OCRLQ01968 901 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 TROAPQ12815 778 aa9.25□□□□□ -0.93
CTNND1-232ENST00000532649 LBRQ14739 615 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms