RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 RPS6KC1Q96S38 1066 aa17.04■□□□□ 0.32
CTSB-225ENST00000532409 ZHX3Q9H4I2 956 aa17.04■□□□□ 0.32
CTSB-225ENST00000532409 DAXXQ9UER7 740 aaPredicted RBP17.04■□□□□ 0.32
CTSB-225ENST00000532409 CD207Q9UJ71 328 aa17.04■□□□□ 0.32
CTSB-225ENST00000532409 RBM19Q9Y4C8 960 aaKnown RBP17.04■□□□□ 0.32
CTSB-225ENST00000532409 CASTOR2A6NHX0 329 aa17.03■□□□□ 0.32
CTSB-225ENST00000532409 TNFRSF10AO00220 468 aa17.03■□□□□ 0.32
CTSB-225ENST00000532409 CLASP2O75122 1294 aaKnown RBP17.03■□□□□ 0.32
CTSB-225ENST00000532409 FAM13AO94988 1023 aa17.03■□□□□ 0.32
CTSB-225ENST00000532409 KRT18P05783 430 aaKnown RBP17.03■□□□□ 0.32
CTSB-225ENST00000532409 CTSAP10619 480 aa17.03■□□□□ 0.32
CTSB-225ENST00000532409 IGFBP6P24592 240 aaPredicted RBP17.03■□□□□ 0.32
CTSB-225ENST00000532409 DDIT3P35638 169 aa17.03■□□□□ 0.32
CTSB-225ENST00000532409 GRIK3Q13003 919 aa17.03■□□□□ 0.32
CTSB-225ENST00000532409 KCNC3Q14003 757 aa17.03■□□□□ 0.32
CTSB-225ENST00000532409 DCAF4L1Q3SXM0 396 aa17.03■□□□□ 0.32
CTSB-225ENST00000532409 SEZ6Q53EL9 994 aa17.03■□□□□ 0.32
CTSB-225ENST00000532409 MYCT1Q8N699 235 aa17.03■□□□□ 0.32
CTSB-225ENST00000532409 APOL5Q9BWW9 433 aa17.03■□□□□ 0.32
CTSB-225ENST00000532409 ANKFY1Q9P2R3 1169 aa17.03■□□□□ 0.32
CTSB-225ENST00000532409 C2CD2LO14523 706 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 SPTLC2O15270 562 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 MEFVO15553 781 aaPredicted RBP17.02■□□□□ 0.32
CTSB-225ENST00000532409 MBTPS2O43462 519 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 PROZP22891 400 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 ZNF131P52739 623 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 NCKAP1LP55160 1127 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 PTPN14Q15678 1187 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 NAB2Q15742 525 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 RRAGBQ5VZM2 374 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 DYMQ7RTS9 669 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 HAUS6Q7Z4H7 955 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 PDILTQ8N807 584 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 HASPINQ8TF76 798 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 ZNF396Q96N95 335 aaPredicted RBP17.02■□□□□ 0.32
CTSB-225ENST00000532409 TCHPQ9BT92 498 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 CCDC39Q9UFE4 941 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 CDH22Q9UJ99 828 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 ODF2LQ9ULJ1 636 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 HCFC2Q9Y5Z7 792 aa17.02■□□□□ 0.32
CTSB-225ENST00000532409 MORC2Q9Y6X9 1032 aaPredicted RBP17.02■□□□□ 0.32
CTSB-225ENST00000532409 ZMYM2Q9UBW7 1377 aa17.02■□□□□ 0.31
CTSB-225ENST00000532409 MYMKA6NI61 221 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 K7ENM7 598 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 EFEMP2O95967 443 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 NMT1P30419 496 aaKnown RBP17.01■□□□□ 0.31
CTSB-225ENST00000532409 TXLNAP40222 546 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 SMTNP53814 917 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 STRN3Q13033 797 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 TUSC3Q13454 348 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 SMAD4Q13485 552 aaKnown RBP17.01■□□□□ 0.31
CTSB-225ENST00000532409 MPZL3Q6UWV2 235 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 FAM178BQ8IXR5 827 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 SMRP1Q8NCR6 262 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 FEZF2Q8TBJ5 459 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 KHSRPQ92945 711 aaKnown RBP eCLIP17.01■□□□□ 0.31
CTSB-225ENST00000532409 FIZ1Q96SL8 496 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 CDCA3Q99618 268 aaPredicted RBP17.01■□□□□ 0.31
CTSB-225ENST00000532409 GPR62Q9BZJ7 368 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 HAPLN2Q9GZV7 340 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 PARVGQ9HBI0 331 aa17.01■□□□□ 0.31
CTSB-225ENST00000532409 LARSQ9P2J5 1176 aaKnown RBP17.01■□□□□ 0.31
CTSB-225ENST00000532409 TBCAO75347 108 aaKnown RBP17■□□□□ 0.31
CTSB-225ENST00000532409 KIF4AO95239 1232 aa17■□□□□ 0.31
CTSB-225ENST00000532409 EPCAMP16422 314 aa17■□□□□ 0.31
CTSB-225ENST00000532409 GRM5P41594 1212 aa17■□□□□ 0.31
CTSB-225ENST00000532409 COASYQ13057 564 aa17■□□□□ 0.31
CTSB-225ENST00000532409 PUS10Q3MIT2 529 aaKnown RBP17■□□□□ 0.31
CTSB-225ENST00000532409 KANK3Q6NY19 840 aa17■□□□□ 0.31
CTSB-225ENST00000532409 SYCE2Q6PIF2 218 aa17■□□□□ 0.31
CTSB-225ENST00000532409 RNF168Q8IYW5 571 aaPredicted RBP17■□□□□ 0.31
CTSB-225ENST00000532409 TMEM130Q8N3G9 435 aa17■□□□□ 0.31
CTSB-225ENST00000532409 STAMQ92783 540 aa17■□□□□ 0.31
CTSB-225ENST00000532409 HERC2P3Q9BVR0 1158 aa17■□□□□ 0.31
CTSB-225ENST00000532409 COLEC11Q9BWP8 271 aa17■□□□□ 0.31
CTSB-225ENST00000532409 IKZF4Q9H2S9 585 aa17■□□□□ 0.31
CTSB-225ENST00000532409 GOLGA2P5Q9HBQ8 144 aa17■□□□□ 0.31
CTSB-225ENST00000532409 STK17AQ9UEE5 414 aa17■□□□□ 0.31
CTSB-225ENST00000532409 ZDHHC9Q9Y397 364 aa17■□□□□ 0.31
CTSB-225ENST00000532409 USP15Q9Y4E8 981 aaPredicted RBP17■□□□□ 0.31
CTSB-225ENST00000532409 TRAK2O60296 914 aa16.99■□□□□ 0.31
CTSB-225ENST00000532409 LILRB3O75022 631 aa16.99■□□□□ 0.31
CTSB-225ENST00000532409 TOM1L1O75674 476 aa16.99■□□□□ 0.31
CTSB-225ENST00000532409 YEATS4O95619 227 aa16.99■□□□□ 0.31
CTSB-225ENST00000532409 SOD2P04179 222 aa16.99■□□□□ 0.31
CTSB-225ENST00000532409 THP07101 528 aa16.99■□□□□ 0.31
CTSB-225ENST00000532409 CNPP09543 421 aaKnown RBP16.99■□□□□ 0.31
CTSB-225ENST00000532409 MCF2P10911 925 aa16.99■□□□□ 0.31
CTSB-225ENST00000532409 STAT6P42226 847 aa16.99■□□□□ 0.31
CTSB-225ENST00000532409 DNM1Q05193 864 aaKnown RBP16.99■□□□□ 0.31
CTSB-225ENST00000532409 SOX4Q06945 474 aaPredicted RBP16.99■□□□□ 0.31
CTSB-225ENST00000532409 HSP90AA2PQ14568 343 aaPredicted RBP16.99■□□□□ 0.31
CTSB-225ENST00000532409 SMAD2Q15796 467 aaKnown RBP16.99■□□□□ 0.31
CTSB-225ENST00000532409 ZC2HC1CQ53FD0 456 aaPredicted RBP16.99■□□□□ 0.31
CTSB-225ENST00000532409 AXDND1Q5T1B0 1012 aaPredicted RBP16.99■□□□□ 0.31
CTSB-225ENST00000532409 ANKRD54Q6NXT1 300 aa16.99■□□□□ 0.31
CTSB-225ENST00000532409 FUT10Q6P4F1 479 aa16.99■□□□□ 0.31
CTSB-225ENST00000532409 SHC4Q6S5L8 630 aa16.99■□□□□ 0.31
CTSB-225ENST00000532409 TMEM184AQ6ZMB5 413 aa16.99■□□□□ 0.31
CTSB-225ENST00000532409 SFR1Q86XK3 245 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms