RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 BICDL2A1A5D9 508 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 SYCE3A1L190 88 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 HNRNPDLO14979 420 aaKnown RBP13.68□□□□□ -0.22
COPB1-208ENST00000532088 TGFB1I1O43294 461 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 EFCAB14O75071 495 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 SKIP12755 728 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 ZSCAN20P17040 1043 aaPredicted RBP13.68□□□□□ -0.22
COPB1-208ENST00000532088 CCNE1P24864 410 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 ITGB8P26012 769 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 CD52P31358 61 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 CCL23P55773 120 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 ZNF445P59923 1031 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 POU5F1Q01860 360 aaKnown RBP13.68□□□□□ -0.22
COPB1-208ENST00000532088 MCL1Q07820 350 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 DSC3Q14574 896 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 KYAT1Q16773 422 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 EDRF1Q3B7T1 1238 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 DPCR1Q3MIW9 517 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 DCAF4L1Q3SXM0 396 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 ZCWPW2Q504Y3 356 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 SLC27A1Q6PCB7 646 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 MPZL3Q6UWV2 235 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 SLC9A9Q8IVB4 645 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 SMYD4Q8IYR2 804 aaPredicted RBP13.68□□□□□ -0.22
COPB1-208ENST00000532088 DPF3Q92784 378 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 P2RX5Q93086 422 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 BICD1Q96G01 975 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 SCLYQ96I15 445 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 TARS2Q9BW92 718 aaKnown RBP13.68□□□□□ -0.22
COPB1-208ENST00000532088 IL23AQ9NPF7 189 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 C1orf112Q9NSG2 853 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 RWDD2AQ9UIY3 292 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 PIN4Q9Y237 131 aaKnown RBP13.68□□□□□ -0.22
COPB1-208ENST00000532088 LTBP2Q14767 1821 aa13.68□□□□□ -0.22
COPB1-208ENST00000532088 ABLIM1O14639 778 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 B4GALT5O43286 388 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 BAIAP3O94812 1187 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 EDN1P05305 212 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 MCF2P10911 925 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 RAB27AP51159 221 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 KCNA1Q09470 495 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 NFX1Q12986 1120 aaKnown RBP13.67□□□□□ -0.22
COPB1-208ENST00000532088 PAK1Q13153 545 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 ISM2Q6H9L7 571 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 SLC39A4Q6P5W5 647 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 RETREG3Q86VR2 466 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 ZC3H3Q8IXZ2 948 aaKnown RBP13.67□□□□□ -0.22
COPB1-208ENST00000532088 SPSB2Q99619 263 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 TSG101Q99816 390 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 USB1Q9BQ65 265 aaKnown RBP13.67□□□□□ -0.22
COPB1-208ENST00000532088 BPIFA3Q9BQP9 254 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 ADPGKQ9BRR6 497 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 NAT10Q9H0A0 1025 aaKnown RBP13.67□□□□□ -0.22
COPB1-208ENST00000532088 PDZD7Q9H5P4 517 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 AGPAT3Q9NRZ7 376 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 RGS18Q9NS28 235 aa13.67□□□□□ -0.22
COPB1-208ENST00000532088 A0A0B4J269 797 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 ABHD14A-ACY1A0A1B0GW23 586 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 CLDN3O15551 220 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 ZNF623O75123 536 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 CSDE1O75534 798 aaKnown RBP13.66□□□□□ -0.22
COPB1-208ENST00000532088 LDHAP00338 332 aaKnown RBP13.66□□□□□ -0.22
COPB1-208ENST00000532088 FGFR4P22455 802 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
COPB1-208ENST00000532088 FPGSQ05932 587 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 NOLC1Q14978 699 aaKnown RBP eCLIP13.66□□□□□ -0.226e-13■■■■□ 25.3
COPB1-208ENST00000532088 LRSAM1Q6UWE0 723 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 NELFCDQ8IXH7 590 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 DBF4BQ8NFT6 615 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 NELFBQ8WX92 580 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 RSPH1Q8WYR4 309 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 VWCEQ96DN2 955 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 OSBPL7Q9BZF2 842 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 TMX1Q9H3N1 280 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 SEMA6BQ9H3T3 888 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 KIAA1586Q9HCI6 787 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 DMAC2Q9NW81 257 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 MAPK8IP1Q9UQF2 711 aa13.66□□□□□ -0.22
COPB1-208ENST00000532088 DNAH12Q6ZR08 3092 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 A0A0U1RQF3 1178 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 ANKRD63C9JTQ0 380 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 MAPK13O15264 365 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 TLL1O43897 1013 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 ADH1BP00325 375 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 ACTN1P12814 892 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 CSF2RAP15509 400 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 ADSSP30520 456 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 FKBP3Q00688 224 aaKnown RBP13.65□□□□□ -0.22
COPB1-208ENST00000532088 ENPEPQ07075 957 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 IKBKEQ14164 716 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 ZNF568Q3ZCX4 644 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 UBXN11Q5T124 520 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 TTI2Q6NXR4 508 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 ARMCX5Q6P1M9 558 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 PSRC1Q6PGN9 363 aaPredicted RBP13.65□□□□□ -0.22
COPB1-208ENST00000532088 ENOX1Q8TC92 643 aaKnown RBP13.65□□□□□ -0.22
COPB1-208ENST00000532088 BADQ92934 168 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 CPB2Q96IY4 423 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 FBXL18Q96ME1 805 aa13.65□□□□□ -0.22
COPB1-208ENST00000532088 CEP63Q96MT8 703 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms