RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 DRD4P21917 467 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 VTI1AQ96AJ9 217 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 PRMT6Q96LA8 375 aaPredicted RBP12.1□□□□□ -0.47
NXF1-211ENST00000531709 FAM167BQ9BTA0 163 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 PPP1R12CQ9BZL4 782 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 TMEM59LQ9UK28 342 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 DIAPH2O60879 1101 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 VPS72Q15906 364 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 IZUMO3Q5VZ72 239 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 FOXR2Q6PJQ5 311 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 CYFIP1Q7L576 1253 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 NOP9Q86U38 636 aaKnown RBP12.1□□□□□ -0.47
NXF1-211ENST00000531709 CPNE8Q86YQ8 564 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 C4orf33Q8N1A6 199 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 CCDC89Q8N998 374 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 LRRC4BQ9NT99 713 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 USP20Q9Y2K6 914 aa12.1□□□□□ -0.47
NXF1-211ENST00000531709 GCKP35557 465 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 SOX10P56693 466 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 DDR1Q08345 913 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 PLCB4Q15147 1175 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 MTERF2Q49AM1 385 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 FYB2Q5VWT5 728 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 RASGEF1CQ8N431 466 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 EIF1ADQ8N9N8 165 aaKnown RBP12.09□□□□□ -0.47
NXF1-211ENST00000531709 HSD17B14Q9BPX1 270 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 SLC24A3Q9HC58 644 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 ZHX2Q9Y6X8 837 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 GLI3P10071 1580 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 LRRD1A4D1F6 860 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 DDX3YO15523 660 aaKnown RBP12.09□□□□□ -0.47
NXF1-211ENST00000531709 CYP11B1P15538 503 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 RFX1P22670 979 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 PAXIP1Q6ZW49 1069 aaPredicted RBP12.09□□□□□ -0.47
NXF1-211ENST00000531709 TAS1R2Q8TE23 839 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 MASTLQ96GX5 879 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 RALAP11233 206 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 JAM2P57087 298 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 MXRA7P84157 204 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 RPAINQ86UA6 219 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 COL23A1Q86Y22 540 aaPredicted RBP12.09□□□□□ -0.47
NXF1-211ENST00000531709 PALM2Q8IXS6 379 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 RMDN3Q96TC7 470 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 NOP53Q9NZM5 478 aaKnown RBP12.09□□□□□ -0.47
NXF1-211ENST00000531709 VAV3Q9UKW4 847 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 GGPS1O95749 300 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 KRT1P04264 644 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 PLS3P13797 630 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 CNGA1P29973 690 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 DCAF12L1Q5VU92 463 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 PPP1R21Q6ZMI0 780 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 SLC5A5Q92911 643 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 KDM4CQ9H3R0 1056 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 DNAJC18Q9H819 358 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 ALG13Q9NP73 1137 aaKnown RBP12.09□□□□□ -0.47
NXF1-211ENST00000531709 CHST7Q9NS84 486 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 DCTN4Q9UJW0 460 aa12.09□□□□□ -0.47
NXF1-211ENST00000531709 TLR3O15455 904 aaKnown RBP12.08□□□□□ -0.48
NXF1-211ENST00000531709 SLC26A4O43511 780 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 POLD1P28340 1107 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 CHRNA5P30532 468 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 MAN1A1P33908 653 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 ACOT2P49753 483 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 TRMT10CQ7L0Y3 403 aaKnown RBP12.08□□□□□ -0.48
NXF1-211ENST00000531709 CTAGE3PQ8IX95 158 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 C3orf20Q8ND61 904 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 DEPTORQ8TB45 409 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 NSMCE1Q8WV22 266 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 ZDHHC15Q96MV8 337 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 RBM15Q96T37 977 aaKnown RBP eCLIP12.08□□□□□ -0.484e-6■■■■□ 20.7
NXF1-211ENST00000531709 P2RX7Q99572 595 aaKnown RBP12.08□□□□□ -0.48
NXF1-211ENST00000531709 FAM198AQ9UFP1 575 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 CACNA1SQ13698 1873 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 IGKV6D-41A0A0C4DH26 115 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 H0YGN5 161 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 KRT19P08727 400 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 ECHS1P30084 290 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 SPIRE1Q08AE8 756 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 GPS1Q13098 491 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 DNAJC3Q13217 504 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 P3H1Q32P28 736 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 WDR78Q5VTH9 848 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 C15orf52Q6ZUT6 534 aaKnown RBP12.08□□□□□ -0.48
NXF1-211ENST00000531709 PRUNE1Q86TP1 453 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 MCF2L2Q86YR7 1114 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 ATL2Q8NHH9 583 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 MCUR1Q96AQ8 359 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 ACSF2Q96CM8 615 aaPredicted RBP12.08□□□□□ -0.48
NXF1-211ENST00000531709 STAMBPL1Q96FJ0 436 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 LRRC4CQ9HCJ2 640 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 GEMIN8Q9NWZ8 242 aaKnown RBP12.08□□□□□ -0.48
NXF1-211ENST00000531709 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.48
NXF1-211ENST00000531709 NFS1Q9Y697 457 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 ITIH2P19823 946 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 RRM1P23921 792 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 CDC25CP30307 473 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 POLGP54098 1239 aaPredicted RBP12.08□□□□□ -0.48
NXF1-211ENST00000531709 TRPC3Q13507 836 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 SYCP2LQ5T4T6 812 aa12.08□□□□□ -0.48
NXF1-211ENST00000531709 SWT1Q5T5J6 900 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms