RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 LONRF3Q496Y0 759 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 PLA2G4FQ68DD2 849 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 SLC27A1Q6PCB7 646 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 NEK8Q86SG6 692 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 KSR1Q8IVT5 923 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 SUMF1Q8NBK3 374 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 SMG8Q8ND04 991 aaKnown RBP8.29□□□□□ -1.08
NUP98-217ENST00000530345 ATRIPQ8WXE1 791 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 RSAD2Q8WXG1 361 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 PIK3R5Q8WYR1 880 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 JAKMIP1Q96N16 626 aaKnown RBP8.29□□□□□ -1.08
NUP98-217ENST00000530345 GAD1Q99259 594 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 LXNQ9BS40 222 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 MINDY3Q9H8M7 445 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 NCDNQ9UBB6 729 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 VAV3Q9UKW4 847 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 NUMBLQ9Y6R0 609 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 R4GN57 208 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 LAMA1P25391 3075 aa8.29□□□□□ -1.08
NUP98-217ENST00000530345 CCDC194A0A1B0GVG4 234 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 MED19A0JLT2 244 aaPredicted RBP8.28□□□□□ -1.08
NUP98-217ENST00000530345 TMEM150BA6NC51 233 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 INO80B-WBP1J3KQ70 363 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 TBC1D4O60343 1298 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 FOXD2O60548 495 aaPredicted RBP8.28□□□□□ -1.08
NUP98-217ENST00000530345 LRP3O75074 770 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 LYPLA2O95372 231 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 BAG4O95429 457 aaKnown RBP8.28□□□□□ -1.08
NUP98-217ENST00000530345 DCNP07585 359 aaKnown RBP8.28□□□□□ -1.08
NUP98-217ENST00000530345 PDIA3P30101 505 aaKnown RBP8.28□□□□□ -1.08
NUP98-217ENST00000530345 SCNN1GP51170 649 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 TUSC3Q13454 348 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 HSP90AA2PQ14568 343 aaPredicted RBP8.28□□□□□ -1.08
NUP98-217ENST00000530345 XKR9Q5GH70 373 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 SPECC1Q5M775 1068 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 PPM1LQ5SGD2 360 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 VARS2Q5ST30 1063 aaKnown RBP8.28□□□□□ -1.08
NUP98-217ENST00000530345 ZBTB41Q5SVQ8 909 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 RIN2Q8WYP3 895 aaPredicted RBP8.28□□□□□ -1.08
NUP98-217ENST00000530345 DNASE1L2Q92874 299 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 TMEM143Q96AN5 459 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 CCDC43Q96MW1 224 aaKnown RBP8.28□□□□□ -1.08
NUP98-217ENST00000530345 TTPALQ9BTX7 342 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 EPC1Q9H2F5 836 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 SLKQ9H2G2 1235 aaPredicted RBP8.28□□□□□ -1.08
NUP98-217ENST00000530345 AVENQ9NQS1 362 aaPredicted RBP8.28□□□□□ -1.08
NUP98-217ENST00000530345 ANKEF1Q9NU02 776 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 SPATA6Q9NWH7 488 aaPredicted RBP8.28□□□□□ -1.08
NUP98-217ENST00000530345 ZSCAN32Q9NX65 697 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 GDE1Q9NZC3 331 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 ATRXP46100 2492 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 KIF26AQ9ULI4 1882 aaPredicted RBP8.28□□□□□ -1.08
NUP98-217ENST00000530345 STK36Q9NRP7 1315 aa8.28□□□□□ -1.08
NUP98-217ENST00000530345 NUP205Q92621 2012 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 TCHHQ07283 1943 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 A0A1B0GUA9 196 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 TMEM189-UBE2V1I3L0A0 370 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 EML1O00423 815 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 ADAMTS3O15072 1205 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 MARCH6O60337 910 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 LILRB5O75023 590 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 TADA2AO75478 443 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 ECI2O75521 394 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 XRCC6P12956 609 aaKnown RBP eCLIP8.27□□□□□ -1.09
NUP98-217ENST00000530345 ARF4P18085 180 aaPredicted RBP8.27□□□□□ -1.09
NUP98-217ENST00000530345 RBM25P49756 843 aaKnown RBP8.27□□□□□ -1.09
NUP98-217ENST00000530345 AFF1P51825 1210 aaKnown RBP8.27□□□□□ -1.09
NUP98-217ENST00000530345 NRLP54845 237 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 NPEPPSP55786 919 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 MBTD1Q05BQ5 628 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 PSMD5Q16401 504 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 C1orf228Q6PIY5 440 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.27□□□□□ -1.09
NUP98-217ENST00000530345 MAMSTRQ6ZN01 415 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 APBB1IPQ7Z5R6 666 aaPredicted RBP8.27□□□□□ -1.09
NUP98-217ENST00000530345 PALB2Q86YC2 1186 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 ZBTB44Q8NCP5 570 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 NELL1Q92832 810 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 FGF13Q92913 245 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 CLDN23Q96B33 292 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 ZNF274Q96GC6 653 aaPredicted RBP8.27□□□□□ -1.09
NUP98-217ENST00000530345 ZFP42Q96MM3 310 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 SH2D3AQ9BRG2 576 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 RTKNQ9BST9 563 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 PHF20Q9BVI0 1012 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 EIF2AQ9BY44 585 aaKnown RBP8.27□□□□□ -1.09
NUP98-217ENST00000530345 GPR62Q9BZJ7 368 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 PRMT8Q9NR22 394 aaPredicted RBP8.27□□□□□ -1.09
NUP98-217ENST00000530345 PRMT7Q9NVM4 692 aaPredicted RBP8.27□□□□□ -1.09
NUP98-217ENST00000530345 GMEB2Q9UKD1 530 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 CDV3Q9UKY7 258 aaKnown RBP8.27□□□□□ -1.09
NUP98-217ENST00000530345 ANK1P16157 1881 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 PI4KAP42356 2102 aa8.27□□□□□ -1.09
NUP98-217ENST00000530345 MAN2B1O00754 1011 aa8.26□□□□□ -1.09
NUP98-217ENST00000530345 N4BP3O15049 544 aa8.26□□□□□ -1.09
NUP98-217ENST00000530345 SLC37A4O43826 429 aa8.26□□□□□ -1.09
NUP98-217ENST00000530345 C8AP07357 584 aa8.26□□□□□ -1.09
NUP98-217ENST00000530345 CAPSQ13938 189 aa8.26□□□□□ -1.09
NUP98-217ENST00000530345 RAB33AQ14088 237 aa8.26□□□□□ -1.09
NUP98-217ENST00000530345 UBXN2BQ14CS0 331 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms