RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 PPP1R11O60927 126 aaPredicted RBP10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 CTSHP09668 335 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 PI3P19957 117 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 SMARCA1P28370 1054 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 KIF5BP33176 963 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 OAZ1P54368 228 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 RAD51AP2Q09MP3 1159 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 IKQ13123 557 aaPredicted RBP10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 ANKRD1Q15327 319 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 NTRK3Q16288 839 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 CDC37Q16543 378 aaPredicted RBP10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 ME3Q16798 604 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 GPRC5AQ8NFJ5 357 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 CD99L2Q8TCZ2 262 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 FOXP3Q9BZS1 431 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 ARHGAP39Q9C0H5 1083 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 SPATC1LQ9H0A9 340 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 NCOA5Q9HCD5 579 aaKnown RBP10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 RBM28Q9NW13 759 aaKnown RBP10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 ZNF236Q9UL36 1845 aa10.1□□□□□ -0.79
CCDC90B-217ENST00000530253 N4BP3O15049 544 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 TRIM13O60858 407 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 ZBED4O75132 1171 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 ICAM1P05362 532 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 RAG1P15918 1043 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 PNLIPP16233 465 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 GNAQP50148 359 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 GALK1P51570 392 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 AFF3P51826 1226 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 SOX10P56693 466 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 LACTBP83111 547 aaPredicted RBP10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 SP3Q02447 781 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 TMEM62Q0P6H9 643 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 SCRN1Q12765 414 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 PPP2R5BQ15173 497 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 QRICH1Q2TAL8 776 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 SYNE3Q6ZMZ3 975 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 RIOX2Q8IUF8 465 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 SHCBP1Q8NEM2 672 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 GTF3C6Q969F1 213 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 TCTN2Q96GX1 697 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 PIGSQ96S52 555 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 LZTS2Q9BRK4 669 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 TRAIPQ9BWF2 469 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 TEX13BQ9BXU2 312 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 RAVER2Q9HCJ3 691 aaKnown RBP10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 RIPK3Q9Y572 518 aa10.09□□□□□ -0.79
CCDC90B-217ENST00000530253 BRCA2P51587 3418 aa10.08□□□□□ -0.8
CCDC90B-217ENST00000530253 PLXNB2O15031 1838 aa10.08□□□□□ -0.8
CCDC90B-217ENST00000530253 ZBTB5O15062 677 aa10.08□□□□□ -0.8
CCDC90B-217ENST00000530253 CTDNEP1O95476 244 aa10.08□□□□□ -0.8
CCDC90B-217ENST00000530253 IFNAR1P17181 557 aa10.08□□□□□ -0.8
CCDC90B-217ENST00000530253 ERCC3P19447 782 aa10.08□□□□□ -0.8
CCDC90B-217ENST00000530253 STAT3P40763 770 aa10.08□□□□□ -0.8
CCDC90B-217ENST00000530253 CCT2P78371 535 aaKnown RBP10.08□□□□□ -0.8
CCDC90B-217ENST00000530253 SNRNP48Q6IEG0 339 aaKnown RBP10.08□□□□□ -0.8
CCDC90B-217ENST00000530253 CCDC174Q6PII3 467 aa10.08□□□□□ -0.8
CCDC90B-217ENST00000530253 NOL8Q76FK4 1167 aaKnown RBP10.08□□□□□ -0.8
CCDC90B-217ENST00000530253 GOLM1Q8NBJ4 401 aa10.08□□□□□ -0.8
CCDC90B-217ENST00000530253 TRIM17Q9Y577 477 aa10.08□□□□□ -0.8
CCDC90B-217ENST00000530253 CCDC196A0A1B0GTZ2 297 aa10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 SORBS3O60504 671 aa10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 ARL4AP40617 200 aa10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 STK3Q13188 491 aa10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 SND1Q7KZF4 910 aaKnown RBP eCLIP10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 OTOP1Q7RTM1 612 aa10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 CPXCR1Q8N123 301 aa10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 NECAB1Q8N987 351 aa10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 CXorf38Q8TB03 319 aa10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 CLEC4DQ8WXI8 215 aa10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 VAT1LQ9HCJ6 419 aa10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 GMIPQ9P107 970 aa10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 TNFRSF10DQ9UBN6 386 aa10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 NAP1L2Q9ULW6 460 aaPredicted RBP10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 LIMCH1Q9UPQ0 1083 aa10.07□□□□□ -0.8
CCDC90B-217ENST00000530253 MGAMO43451 1857 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 MKI67P46013 3256 aaKnown RBP10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 hCG_1642624A0A1W2PR95 340 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 DHX16O60231 1041 aaKnown RBP10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 DNAJA2O60884 412 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 SLC25A27O95847 323 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 MAPK4P31152 587 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 VIPR1P32241 457 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 COPB2P35606 906 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 PSMC4P43686 418 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 YBX1P67809 324 aaKnown RBP10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 CCNA1P78396 465 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 GHRHRQ02643 423 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 FAM160A1Q05DH4 1040 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 GRB14Q14449 540 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 PLS1Q14651 629 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 TKFCQ3LXA3 575 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 MUM1L1Q5H9M0 696 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 GALNT18Q6P9A2 607 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 GPR142Q7Z601 462 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 HOMER1Q86YM7 354 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 USP6NLQ92738 828 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 PHKBQ93100 1093 aa10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 DACT3Q96B18 629 aaPredicted RBP10.06□□□□□ -0.8
CCDC90B-217ENST00000530253 ERO1AQ96HE7 468 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms