RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 GLUD1P00367 558 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 YWHABP31946 246 aaKnown RBP6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 MLH1P40692 756 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 RFC5P40937 340 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 SCNN1GP51170 649 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 POU5F1BQ06416 359 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 PCBP1Q15365 356 aaKnown RBP eCLIP6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 NFKBIBQ15653 356 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 ARSIQ5FYB1 569 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 ATL3Q6DD88 541 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 PPP4R3AQ6IN85 833 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 CPLX2Q6PUV4 134 aaKnown RBP6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 OTUD6AQ7L8S5 288 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 KRT25Q7Z3Z0 450 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 PALB2Q86YC2 1186 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 TRIM22Q8IYM9 498 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 FAM177A1Q8N128 213 aaPredicted RBP6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 GPR152Q8TDT2 470 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 TCP11Q8WWU5 503 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 RIN2Q8WYP3 895 aaPredicted RBP6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 SMG7Q92540 1137 aaKnown RBP6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 GTF3C6Q969F1 213 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 RMDN1Q96DB5 314 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 CPB2Q96IY4 423 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 ZFP42Q96MM3 310 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 RPP25Q9BUL9 199 aaKnown RBP6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 COLEC11Q9BWP8 271 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 GPR62Q9BZJ7 368 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 PRKD2Q9BZL6 878 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 CSRNP2Q9H175 543 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 PLEKHA4Q9H4M7 779 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 TBC1D17Q9HA65 648 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 XPNPEP1Q9NQW7 623 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 RGL1Q9NZL6 768 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 FNIP2Q9P278 1114 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 CA14Q9ULX7 337 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 KCNJ14Q9UNX9 436 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 GIT1Q9Y2X7 761 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 HES2Q9Y543 173 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 R4GN57 208 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 NOTCH4Q99466 2003 aa6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 EP300Q09472 2414 aaPredicted RBP6.89□□□□□ -1.31
CHRNA6-202ENST00000529467 VPS13AQ96RL7 3174 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 TRIP11Q15643 1979 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 MYH15Q9Y2K3 1946 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 ARID2Q68CP9 1835 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 C2orf72A6NCS6 295 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 TBX3O15119 743 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 ZMYND10O75800 440 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 ERLIN2O94905 339 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 DCNP07585 359 aaKnown RBP6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 SP9P0CG40 484 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 GLULP15104 373 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 ARF4P18085 180 aaPredicted RBP6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 MCM4P33991 863 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 ARL2P36404 184 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 STARD6P59095 220 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 SPIRE1Q08AE8 756 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 HTR4Q13639 388 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 CTTNQ14247 550 aaKnown RBP6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 MXD4Q14582 209 aaPredicted RBP6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 EMC2Q15006 297 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 AMHR2Q16671 573 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 ME3Q16798 604 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 USP41Q3LFD5 358 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 XKR9Q5GH70 373 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 FUT10Q6P4F1 479 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 NOTUMQ6P988 496 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 ELMSAN1Q6PJG2 1045 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 NEK8Q86SG6 692 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 C1orf210Q8IVY1 113 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 ST13P5Q8NFI4 369 aaPredicted RBP6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 KCNG4Q8TDN1 519 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 RNF166Q96A37 237 aaPredicted RBP6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 CCDC51Q96ER9 411 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 DYDC2Q96IM9 177 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 B3GALT6Q96L58 329 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 MTRQ99707 1265 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 LARP6Q9BRS8 491 aaKnown RBP6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 LXNQ9BS40 222 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 PHF20Q9BVI0 1012 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 ZSCAN16Q9H4T2 348 aaPredicted RBP6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 ZSWIM4Q9H7M6 989 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 PIDD1Q9HB75 910 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 SLC2A4RGQ9NR83 387 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 ZDHHC7Q9NXF8 308 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 TPCN1Q9ULQ1 816 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 SIT1Q9Y3P8 196 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 GVINP1Q7Z2Y8 2422 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 MIA3Q5JRA6 1907 aa6.88□□□□□ -1.31
CHRNA6-202ENST00000529467 A0A1B0GUA9 196 aa6.87□□□□□ -1.31
CHRNA6-202ENST00000529467 CCDC194A0A1B0GVG4 234 aa6.87□□□□□ -1.31
CHRNA6-202ENST00000529467 INO80B-WBP1J3KQ70 363 aa6.87□□□□□ -1.31
CHRNA6-202ENST00000529467 CPLX1O14810 134 aa6.87□□□□□ -1.31
CHRNA6-202ENST00000529467 STX6O43752 255 aa6.87□□□□□ -1.31
CHRNA6-202ENST00000529467 CCNT1O60563 726 aaKnown RBP6.87□□□□□ -1.31
CHRNA6-202ENST00000529467 LRRN2O75325 713 aa6.87□□□□□ -1.31
CHRNA6-202ENST00000529467 NR1I2O75469 434 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms