RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 SNTG2Q9NY99 539 aa12.48□□□□□ -0.41
CAPN1-217ENST00000529133 CPSF3Q9UKF6 684 aaKnown RBP12.48□□□□□ -0.41
CAPN1-217ENST00000529133 MEIS3P2A8K0S8 358 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 CETN3O15182 167 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 AKAP3O75969 853 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 RECQL4O94761 1208 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 LDHAP00338 332 aaKnown RBP12.47□□□□□ -0.41
CAPN1-217ENST00000529133 AMHP03971 560 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 CLTAP09496 248 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 ITGA4P13612 1032 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 AKAP5P24588 427 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 ZNF165P49910 485 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 DEFB103AP81534 67 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 MYL5Q02045 173 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 ENOX2Q16206 610 aaKnown RBP12.47□□□□□ -0.41
CAPN1-217ENST00000529133 SPATA1Q5VX52 437 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 CEP135Q66GS9 1140 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 AGMOQ6ZNB7 445 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 NPAS4Q8IUM7 802 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 BRSK2Q8IWQ3 736 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 DHX40Q8IX18 779 aaKnown RBP12.47□□□□□ -0.41
CAPN1-217ENST00000529133 HACE1Q8IYU2 909 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 CRIPAKQ8N1N5 446 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 AOPEPQ8N6M6 819 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 RNF169Q8NCN4 708 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 PGBD4Q96DM1 585 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 CEP63Q96MT8 703 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 SRRTQ9BXP5 876 aaKnown RBP12.47□□□□□ -0.41
CAPN1-217ENST00000529133 ELAC1Q9H777 363 aaKnown RBP12.47□□□□□ -0.41
CAPN1-217ENST00000529133 KIAA1586Q9HCI6 787 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 RNF19AQ9NV58 838 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 TMEM161AQ9NX61 479 aa12.47□□□□□ -0.41
CAPN1-217ENST00000529133 CXXC1Q9P0U4 656 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-217ENST00000529133 ZNF233A6NK53 670 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 ZBBXA8MT70 800 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 SLC16A3O15427 465 aaKnown RBP12.46□□□□□ -0.41
CAPN1-217ENST00000529133 CAVIN2O95810 425 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 EOMESO95936 686 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 CXCL8P10145 99 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 KCNJ6P48051 423 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 MLLT1Q03111 559 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-217ENST00000529133 HSP90AA2PQ14568 343 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-217ENST00000529133 NCAPHQ15003 741 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 SNRNP35Q16560 246 aaKnown RBP12.46□□□□□ -0.41
CAPN1-217ENST00000529133 TPD52L1Q16890 204 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-217ENST00000529133 C9orf50Q5SZB4 431 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 RASIP1Q5U651 963 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 FAM186BQ8IYM0 893 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 RDH13Q8NBN7 331 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 SNX27Q96L92 541 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 ACAP3Q96P50 834 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 GDF15Q99988 308 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 MKNK1Q9BUB5 465 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 RPF1Q9H9Y2 349 aaKnown RBP12.46□□□□□ -0.41
CAPN1-217ENST00000529133 CBX8Q9HC52 389 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 RBAKQ9NYW8 714 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-217ENST00000529133 PARP2Q9UGN5 583 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 LRFN2Q9ULH4 789 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 FRMD4BQ9Y2L6 1034 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 NFE2L3Q9Y4A8 694 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 PCDHB7Q9Y5E2 793 aa12.46□□□□□ -0.41
CAPN1-217ENST00000529133 IKBKBO14920 756 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 MAPK13O15264 365 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 FGFR1OPO95684 399 aaKnown RBP12.45□□□□□ -0.42
CAPN1-217ENST00000529133 EPB41P11171 864 aaKnown RBP12.45□□□□□ -0.42
CAPN1-217ENST00000529133 FGFR1P11362 822 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 PSMC2P35998 433 aaKnown RBP12.45□□□□□ -0.42
CAPN1-217ENST00000529133 MLH1P40692 756 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 GATMP50440 423 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 YARSP54577 528 aaKnown RBP12.45□□□□□ -0.42
CAPN1-217ENST00000529133 WNT7BP56706 349 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 POU5F1Q01860 360 aaKnown RBP12.45□□□□□ -0.42
CAPN1-217ENST00000529133 CYP24A1Q07973 514 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 IQCB1Q15051 598 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 SLC10A6Q3KNW5 377 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 CLLU1OSQ5K130 101 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 TMCO2Q7Z6W1 182 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-217ENST00000529133 FILIP1Q7Z7B0 1213 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 TET1Q8NFU7 2136 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 FAM200AQ8TCP9 573 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 TOP1MTQ969P6 601 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 BORCS6Q96GS4 357 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 MFSD14AQ96MC6 490 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 GAD1Q99259 594 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 UBE2OQ9C0C9 1292 aaKnown RBP12.45□□□□□ -0.42
CAPN1-217ENST00000529133 CXCL16Q9H2A7 254 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 MTIF3Q9H2K0 278 aaKnown RBP12.45□□□□□ -0.42
CAPN1-217ENST00000529133 THAP9Q9H5L6 903 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 RSAD1Q9HA92 442 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 TOPORSQ9NS56 1045 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-217ENST00000529133 RNF216Q9NWF9 866 aaPredicted RBP12.45□□□□□ -0.42
CAPN1-217ENST00000529133 KLK14Q9P0G3 267 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 GIT1Q9Y2X7 761 aa12.45□□□□□ -0.42
CAPN1-217ENST00000529133 MICAL3Q7RTP6 2002 aa12.44□□□□□ -0.42
CAPN1-217ENST00000529133 TTC26A0AVF1 554 aa12.44□□□□□ -0.42
CAPN1-217ENST00000529133 INPPL1O15357 1258 aa12.44□□□□□ -0.42
CAPN1-217ENST00000529133 OFD1O75665 1012 aa12.44□□□□□ -0.42
CAPN1-217ENST00000529133 UPP2O95045 317 aa12.44□□□□□ -0.42
CAPN1-217ENST00000529133 PPP2R3AQ06190 1150 aa12.44□□□□□ -0.42
CAPN1-217ENST00000529133 PSMD6Q15008 389 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms