RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 PPM1LQ5SGD2 360 aa21.15■□□□□ 0.98
SSRP1-204ENST00000529002 MTSS1LQ765P7 747 aa21.15■□□□□ 0.98
SSRP1-204ENST00000529002 SECISBP2LQ93073 1101 aaKnown RBP21.15■□□□□ 0.98
SSRP1-204ENST00000529002 CLDN23Q96B33 292 aa21.15■□□□□ 0.98
SSRP1-204ENST00000529002 PHF20Q9BVI0 1012 aa21.15■□□□□ 0.98
SSRP1-204ENST00000529002 CSRNP2Q9H175 543 aa21.15■□□□□ 0.98
SSRP1-204ENST00000529002 SDK1Q7Z5N4 2213 aa21.14■□□□□ 0.98
SSRP1-204ENST00000529002 TADA2AO75478 443 aa21.14■□□□□ 0.97
SSRP1-204ENST00000529002 MTAPQ13126 283 aa21.14■□□□□ 0.97
SSRP1-204ENST00000529002 TSGA10IPQ3SY00 556 aa21.14■□□□□ 0.97
SSRP1-204ENST00000529002 NOTUMQ6P988 496 aa21.14■□□□□ 0.97
SSRP1-204ENST00000529002 SKAP1Q86WV1 359 aa21.14■□□□□ 0.97
SSRP1-204ENST00000529002 CEP57Q86XR8 500 aa21.14■□□□□ 0.97
SSRP1-204ENST00000529002 NPAS3Q8IXF0 933 aa21.14■□□□□ 0.97
SSRP1-204ENST00000529002 NCOA5Q9HCD5 579 aaKnown RBP21.14■□□□□ 0.97
SSRP1-204ENST00000529002 HEBP1Q9NRV9 189 aa21.14■□□□□ 0.97
SSRP1-204ENST00000529002 VAV3Q9UKW4 847 aa21.14■□□□□ 0.97
SSRP1-204ENST00000529002 INO80B-WBP1J3KQ70 363 aa21.13■□□□□ 0.97
SSRP1-204ENST00000529002 B4GALT5O43286 388 aa21.13■□□□□ 0.97
SSRP1-204ENST00000529002 ARF4P18085 180 aaPredicted RBP21.13■□□□□ 0.97
SSRP1-204ENST00000529002 PTENP60484 403 aa21.13■□□□□ 0.97
SSRP1-204ENST00000529002 CCT2P78371 535 aaKnown RBP21.13■□□□□ 0.97
SSRP1-204ENST00000529002 PPM1JQ5JR12 505 aa21.13■□□□□ 0.97
SSRP1-204ENST00000529002 LIN9Q5TKA1 542 aa21.13■□□□□ 0.97
SSRP1-204ENST00000529002 LNX1Q8TBB1 728 aaPredicted RBP21.13■□□□□ 0.97
SSRP1-204ENST00000529002 RNF26Q9BY78 433 aaPredicted RBP21.13■□□□□ 0.97
SSRP1-204ENST00000529002 CXCL16Q9H2A7 254 aa21.13■□□□□ 0.97
SSRP1-204ENST00000529002 SLKQ9H2G2 1235 aaPredicted RBP21.13■□□□□ 0.97
SSRP1-204ENST00000529002 XPNPEP1Q9NQW7 623 aa21.13■□□□□ 0.97
SSRP1-204ENST00000529002 PRMT8Q9NR22 394 aaPredicted RBP21.13■□□□□ 0.97
SSRP1-204ENST00000529002 RGL1Q9NZL6 768 aa21.13■□□□□ 0.97
SSRP1-204ENST00000529002 DNMT3BQ9UBC3 853 aaKnown RBP21.13■□□□□ 0.97
SSRP1-204ENST00000529002 GMEB2Q9UKD1 530 aa21.13■□□□□ 0.97
SSRP1-204ENST00000529002 GIT1Q9Y2X7 761 aa21.13■□□□□ 0.97
SSRP1-204ENST00000529002 TICRRQ7Z2Z1 1910 aa21.13■□□□□ 0.97
SSRP1-204ENST00000529002 NID2Q14112 1375 aa21.12■□□□□ 0.97
SSRP1-204ENST00000529002 CASTOR2A6NHX0 329 aa21.12■□□□□ 0.97
SSRP1-204ENST00000529002 NPTXRO95502 500 aa21.12■□□□□ 0.97
SSRP1-204ENST00000529002 HNRNPA1P09651 372 aaKnown RBP eCLIP21.12■□□□□ 0.97
SSRP1-204ENST00000529002 IGFBP6P24592 240 aaPredicted RBP21.12■□□□□ 0.97
SSRP1-204ENST00000529002 PSMD5Q16401 504 aa21.12■□□□□ 0.97
SSRP1-204ENST00000529002 AMHR2Q16671 573 aa21.12■□□□□ 0.97
SSRP1-204ENST00000529002 FAM171A1Q5VUB5 890 aa21.12■□□□□ 0.97
SSRP1-204ENST00000529002 GPR65Q8IYL9 337 aa21.12■□□□□ 0.97
SSRP1-204ENST00000529002 SLC7A14Q8TBB6 771 aa21.12■□□□□ 0.97
SSRP1-204ENST00000529002 MCRS1Q96EZ8 462 aa21.12■□□□□ 0.97
SSRP1-204ENST00000529002 CHAMP1Q96JM3 812 aa21.12■□□□□ 0.97
SSRP1-204ENST00000529002 PARP2Q9UGN5 583 aa21.12■□□□□ 0.97
SSRP1-204ENST00000529002 DDX25Q9UHL0 483 aaKnown RBP21.12■□□□□ 0.97
SSRP1-204ENST00000529002 PCDHA4Q9UN74 947 aa21.12■□□□□ 0.97
SSRP1-204ENST00000529002 TBC1D4O60343 1298 aa21.11■□□□□ 0.97
SSRP1-204ENST00000529002 RFC5P40937 340 aa21.11■□□□□ 0.97
SSRP1-204ENST00000529002 IRX6P78412 446 aaPredicted RBP21.11■□□□□ 0.97
SSRP1-204ENST00000529002 PFKPQ01813 784 aa21.11■□□□□ 0.97
SSRP1-204ENST00000529002 MBTD1Q05BQ5 628 aa21.11■□□□□ 0.97
SSRP1-204ENST00000529002 GRIK3Q13003 919 aa21.11■□□□□ 0.97
SSRP1-204ENST00000529002 HSP90AA2PQ14568 343 aaPredicted RBP21.11■□□□□ 0.97
SSRP1-204ENST00000529002 INF2Q27J81 1249 aa21.11■□□□□ 0.97
SSRP1-204ENST00000529002 XKR9Q5GH70 373 aa21.11■□□□□ 0.97
SSRP1-204ENST00000529002 RSPO2Q6UXX9 243 aaPredicted RBP21.11■□□□□ 0.97
SSRP1-204ENST00000529002 ASAP3Q8TDY4 903 aa21.11■□□□□ 0.97
SSRP1-204ENST00000529002 BORCS6Q96GS4 357 aa21.11■□□□□ 0.97
SSRP1-204ENST00000529002 LXNQ9BS40 222 aa21.11■□□□□ 0.97
SSRP1-204ENST00000529002 TTPALQ9BTX7 342 aa21.11■□□□□ 0.97
SSRP1-204ENST00000529002 TRIM6Q9C030 488 aaPredicted RBP21.11■□□□□ 0.97
SSRP1-204ENST00000529002 NDRG2Q9UN36 371 aaKnown RBP21.11■□□□□ 0.97
SSRP1-204ENST00000529002 CHD6Q8TD26 2715 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.1■□□□□ 0.97
SSRP1-204ENST00000529002 M0R2N6 131 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 NRG2O14511 850 aaPredicted RBP21.1■□□□□ 0.97
SSRP1-204ENST00000529002 KIF4AO95239 1232 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 P4HBP07237 508 aaKnown RBP21.1■□□□□ 0.97
SSRP1-204ENST00000529002 TDGF1P13385 188 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 AXLP30530 894 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 YWHABP31946 246 aaKnown RBP21.1■□□□□ 0.97
SSRP1-204ENST00000529002 MAGEA9P43362 315 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 CREMQ03060 361 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 PPP2R5CQ13362 524 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 CTTNQ14247 550 aaKnown RBP21.1■□□□□ 0.97
SSRP1-204ENST00000529002 NPY5RQ15761 445 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 SLC5A9Q2M3M2 681 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 TCP11Q8WWU5 503 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 PIK3R5Q8WYR1 880 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 CCDC51Q96ER9 411 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 AIFM3Q96NN9 605 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 MTRQ99707 1265 aa21.1■□□□□ 0.97
SSRP1-204ENST00000529002 SF3B1O75533 1304 aaKnown RBP eCLIP21.09■□□□□ 0.97
SSRP1-204ENST00000529002 ASAP2O43150 1006 aa21.09■□□□□ 0.97
SSRP1-204ENST00000529002 IFNAR1P17181 557 aa21.09■□□□□ 0.97
SSRP1-204ENST00000529002 RPS9P46781 194 aaKnown RBP21.09■□□□□ 0.97
SSRP1-204ENST00000529002 CYP4A11Q02928 519 aa21.09■□□□□ 0.97
SSRP1-204ENST00000529002 CAPSQ13938 189 aa21.09■□□□□ 0.97
SSRP1-204ENST00000529002 PABPC1LQ4VXU2 614 aaKnown RBP21.09■□□□□ 0.97
SSRP1-204ENST00000529002 AXDND1Q5T1B0 1012 aaPredicted RBP21.09■□□□□ 0.97
SSRP1-204ENST00000529002 TANGO2Q6ICL3 276 aa21.09■□□□□ 0.97
SSRP1-204ENST00000529002 BLIDQ8IZY5 108 aa21.09■□□□□ 0.97
SSRP1-204ENST00000529002 DYDC2Q96IM9 177 aa21.09■□□□□ 0.97
SSRP1-204ENST00000529002 JAKMIP1Q96N16 626 aaKnown RBP21.09■□□□□ 0.97
SSRP1-204ENST00000529002 COL4A2P08572 1712 aa21.09■□□□□ 0.97
SSRP1-204ENST00000529002 SLC30A4O14863 429 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms