RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 ITGA2BP08514 1039 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 TMEM253P0C7T8 217 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 ZBTB48P10074 688 aaPredicted RBP9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 SMPD1P17405 629 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 RFX1P22670 979 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 MCM7P33993 719 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 CD97P48960 835 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 PTK2Q05397 1052 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 ASPHQ12797 758 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 HNRNPDQ14103 355 aaKnown RBP9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 SEC23AQ15436 765 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 CYP1B1Q16678 543 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 EDRF1Q3B7T1 1238 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 SEL1L2Q5TEA6 688 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 ALKBH5Q6P6C2 394 aaKnown RBP9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 CCDC62Q6P9F0 684 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 B3GNT6Q6ZMB0 384 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 KRT25Q7Z3Z0 450 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 LRP10Q7Z4F1 713 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 CRIPAKQ8N1N5 446 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 C12orf50Q8NA57 414 aaPredicted RBP9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 DIS3LQ8TF46 1054 aaKnown RBP9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 DDI1Q8WTU0 396 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 NAT14Q8WUY8 206 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 C7orf43Q8WVR3 580 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 ART4Q93070 314 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 MCUR1Q96AQ8 359 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 ERP27Q96DN0 273 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 BTBD10Q9BSF8 475 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 TCHPQ9BT92 498 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 LSM14BQ9BX40 385 aaKnown RBP9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 CCDC113Q9H0I3 377 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 EPB41L4BQ9H329 900 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 NKX1-2Q9UD57 310 aaPredicted RBP9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 ARMCX3Q9UH62 379 aaPredicted RBP9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 ZFP69BQ9UJL9 534 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 NAGPAQ9UK23 515 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 ZNF232Q9UNY5 417 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 MAPK8IP1Q9UQF2 711 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 WASF2Q9Y6W5 498 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 DOCK2Q92608 1830 aa9.66□□□□□ -0.86
CAPRIN1-206ENST00000528948 NUP188Q5SRE5 1749 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 ARAP2Q8WZ64 1704 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 TNKSO95271 1327 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 RPTORQ8N122 1335 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 CNTNAP5Q8WYK1 1306 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 MYH1P12882 1939 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 TCRBV5S4A2TA0A5A2 114 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 IPO5O00410 1097 aaKnown RBP9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 DNAJC6O75061 913 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 FGGP02679 453 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 FAM163BP0C2L3 166 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 OR52Z1P0C646 297 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 BRAFP15056 766 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 RASA1P20936 1047 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 CRABP2P29373 138 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 IFNAR2P48551 515 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 KLK7P49862 253 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 SMCPP49901 116 aaPredicted RBP9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 RAP1GDS1P52306 607 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 PLTPP55058 493 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 SESN3P58005 492 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 CDK18Q07002 472 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 IFIT5Q13325 482 aaKnown RBP9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 TCIRG1Q13488 830 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 DCTN2Q13561 401 aaKnown RBP9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 GIT2Q14161 759 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 TMEM266Q2M3C6 531 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 DNAL1Q4LDG9 190 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 ZCWPW2Q504Y3 356 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 SLC44A4Q53GD3 710 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 C11orf63Q6NUN7 778 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 BORAQ6PGQ7 559 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 LRRC55Q6ZSA7 311 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 PIK3AP1Q6ZUJ8 805 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 CENPUQ71F23 418 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 DDX42Q86XP3 938 aaKnown RBP eCLIP9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 ECHDC2Q86YB7 292 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 TDRPQ86YL5 185 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 ZC3H3Q8IXZ2 948 aaKnown RBP9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 FAM186BQ8IYM0 893 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 MYOCDQ8IZQ8 938 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 ANKRD13CQ8N6S4 541 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 SCFD1Q8WVM8 642 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 STAMQ92783 540 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 UTP4Q969X6 686 aaKnown RBP9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 ZSCAN10Q96SZ4 725 aaPredicted RBP9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 MYL10Q9BUA6 226 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 NT5C3AQ9H0P0 336 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 MYLK2Q9H1R3 596 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 DHX36Q9H2U1 1008 aaKnown RBP9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 ARHGEF10LQ9HCE6 1279 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 PREBQ9HCU5 417 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 HMX1Q9NP08 348 aaPredicted RBP9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 TBX22Q9Y458 520 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 NUB1Q9Y5A7 615 aa9.65□□□□□ -0.86
CAPRIN1-206ENST00000528948 UBR1Q8IWV7 1749 aa9.65□□□□□ -0.87
CAPRIN1-206ENST00000528948 A0A087X0T9 212 aa9.64□□□□□ -0.87
CAPRIN1-206ENST00000528948 A8MUI8 341 aa9.64□□□□□ -0.87
CAPRIN1-206ENST00000528948 hCG_1984214I3L0E3 225 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms