RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 SPIRE2Q8WWL2 714 aa15.68■□□□□ 0.1
CAPN1-216ENST00000528739 REEP2Q9BRK0 252 aa15.68■□□□□ 0.1
CAPN1-216ENST00000528739 CCSER1Q9C0I3 900 aa15.68■□□□□ 0.1
CAPN1-216ENST00000528739 BLOC1S4Q9NUP1 217 aa15.68■□□□□ 0.1
CAPN1-216ENST00000528739 ARHGAP28Q9P2N2 729 aa15.68■□□□□ 0.1
CAPN1-216ENST00000528739 ANKFY1Q9P2R3 1169 aa15.68■□□□□ 0.1
CAPN1-216ENST00000528739 ODF2LQ9ULJ1 636 aa15.68■□□□□ 0.1
CAPN1-216ENST00000528739 SSX2IPQ9Y2D8 614 aa15.68■□□□□ 0.1
CAPN1-216ENST00000528739 A0A0C4DFX4 3053 aa15.68■□□□□ 0.1
CAPN1-216ENST00000528739 MYO7AQ13402 2215 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 SPTBN5Q9NRC6 3674 aaKnown RBP15.67■□□□□ 0.1
CAPN1-216ENST00000528739 K7ENM7 598 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 TULP1O00294 542 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-216ENST00000528739 INPPL1O15357 1258 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 SOD2P04179 222 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 DSC1Q08554 894 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 SLC39A14Q15043 492 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 GLRA4Q5JXX5 417 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 ANKRD54Q6NXT1 300 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 DYMQ7RTS9 669 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 CEP57Q86XR8 500 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 VN1R2Q8NFZ6 395 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 HASPINQ8TF76 798 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 MSLNLQ96KJ4 702 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 CDT1Q9H211 546 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 PARVGQ9HBI0 331 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 TOPORSQ9NS56 1045 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-216ENST00000528739 MARCH5Q9NX47 278 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 CACNG4Q9UBN1 327 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 HCFC2Q9Y5Z7 792 aa15.67■□□□□ 0.1
CAPN1-216ENST00000528739 XIRP2A4UGR9 3374 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 F8W810 466 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 SPTLC2O15270 562 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 TRAK2O60296 914 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 ZSCAN22P10073 491 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-216ENST00000528739 PDIA4P13667 645 aaKnown RBP15.66■□□□□ 0.1
CAPN1-216ENST00000528739 STAT6P42226 847 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 LIG4P49917 911 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 COASYQ13057 564 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 TUSC3Q13454 348 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 PTPN14Q15678 1187 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 SMAD2Q15796 467 aaKnown RBP15.66■□□□□ 0.1
CAPN1-216ENST00000528739 TPRNQ4KMQ1 711 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 CES5AQ6NT32 575 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 MPZL3Q6UWV2 235 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 SV2BQ7L1I2 683 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 TAS1R3Q7RTX0 852 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 TAS1R1Q7RTX1 841 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 HAUS6Q7Z4H7 955 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 PPFIBP1Q86W92 1011 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 PDILTQ8N807 584 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 CEP120Q8N960 986 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 TMEM161BQ8NDZ6 487 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 GSTCDQ8NEC7 633 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 LRRC15Q8TF66 581 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 ZBTB45Q96K62 511 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-216ENST00000528739 ACAP3Q96P50 834 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 POP1Q99575 1024 aaKnown RBP15.66■□□□□ 0.1
CAPN1-216ENST00000528739 NTPCRQ9BSD7 190 aaKnown RBP15.66■□□□□ 0.1
CAPN1-216ENST00000528739 HERC2P3Q9BVR0 1158 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 VN1R3Q9BXE9 311 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 PRKAG3Q9UGI9 489 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 ADAM28Q9UKQ2 775 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 USP15Q9Y4E8 981 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-216ENST00000528739 TRANK1O15050 2925 aa15.66■□□□□ 0.1
CAPN1-216ENST00000528739 CLDN3O15551 220 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 MYBP10242 640 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 MAPTP10636 758 aaKnown RBP15.65■□□□□ 0.1
CAPN1-216ENST00000528739 MCF2P10911 925 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 GRM5P41594 1212 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 GLUD2P49448 558 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 HSP90AA2PQ14568 343 aaPredicted RBP15.65■□□□□ 0.1
CAPN1-216ENST00000528739 SEZ6Q53EL9 994 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 FUT10Q6P4F1 479 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 CCDC73Q6ZRK6 1079 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 GLYCTKQ8IVS8 523 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 ADHFE1Q8IWW8 467 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 LINC00301Q8NCQ3 95 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 SMRP1Q8NCR6 262 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 RPGRIP1Q96KN7 1286 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 KLHL5Q96PQ7 755 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 CXCL16Q9H2A7 254 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 STK17AQ9UEE5 414 aa15.65■□□□□ 0.1
CAPN1-216ENST00000528739 REV3LO60673 3130 aa15.64■□□□□ 0.09
CAPN1-216ENST00000528739 PTGESO14684 152 aa15.64■□□□□ 0.09
CAPN1-216ENST00000528739 TOM1L1O75674 476 aa15.64■□□□□ 0.09
CAPN1-216ENST00000528739 F13A1P00488 732 aa15.64■□□□□ 0.09
CAPN1-216ENST00000528739 CNPP09543 421 aaKnown RBP15.64■□□□□ 0.09
CAPN1-216ENST00000528739 EPCAMP16422 314 aa15.64■□□□□ 0.09
CAPN1-216ENST00000528739 HOXB8P17481 243 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-216ENST00000528739 NASPP49321 788 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-216ENST00000528739 NCKAP1LP55160 1127 aa15.64■□□□□ 0.09
CAPN1-216ENST00000528739 NOLC1Q14978 699 aaKnown RBP eCLIP15.64■□□□□ 0.09
CAPN1-216ENST00000528739 USP41Q3LFD5 358 aa15.64■□□□□ 0.09
CAPN1-216ENST00000528739 RARS2Q5T160 578 aaKnown RBP15.64■□□□□ 0.09
CAPN1-216ENST00000528739 TMEM184AQ6ZMB5 413 aa15.64■□□□□ 0.09
CAPN1-216ENST00000528739 C12orf76Q8N812 135 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-216ENST00000528739 RIN2Q8WYP3 895 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-216ENST00000528739 B3GALT6Q96L58 329 aa15.64■□□□□ 0.09
CAPN1-216ENST00000528739 PAAF1Q9BRP4 392 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms