RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 L2HGDHQ9H9P8 463 aa4.04□□□□□ -1.76
CD44-229ENST00000528672 FBXO10Q9UK96 956 aa4.04□□□□□ -1.76
CD44-229ENST00000528672 SIK3Q9Y2K2 1263 aa4.04□□□□□ -1.76
CD44-229ENST00000528672 PCDHB6Q9Y5E3 794 aa4.04□□□□□ -1.76
CD44-229ENST00000528672 PCDHGB6Q9Y5F9 930 aa4.04□□□□□ -1.76
CD44-229ENST00000528672 NUMBLQ9Y6R0 609 aa4.04□□□□□ -1.76
CD44-229ENST00000528672 ABHD14A-ACY1A0A1B0GW23 586 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 H0Y858 1186 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 MATN2O00339 956 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 GOLIM4O00461 696 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 MAFGO15525 162 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 B3GALT2O43825 422 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 LY86O95711 162 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 SYN1P17600 705 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 HALP42357 657 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 CACNB3P54284 484 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 ATP2C1P98194 919 aaPredicted RBP4.03□□□□□ -1.76
CD44-229ENST00000528672 IFIT5Q13325 482 aaKnown RBP4.03□□□□□ -1.76
CD44-229ENST00000528672 SEMA5AQ13591 1074 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 SPIDRQ14159 915 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 KRT72Q14CN4 511 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 UBE3CQ15386 1083 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 ANO4Q32M45 955 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 NT5DC1Q5TFE4 455 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 RNF220Q5VTB9 566 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 TMEM200BQ69YZ2 307 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 XRRA1Q6P2D8 792 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 NPNTQ6UXI9 565 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 SMAP1Q8IYB5 467 aaPredicted RBP4.03□□□□□ -1.76
CD44-229ENST00000528672 ZGPATQ8N5A5 531 aaKnown RBP4.03□□□□□ -1.76
CD44-229ENST00000528672 CELF5Q8N6W0 485 aaKnown RBP4.03□□□□□ -1.76
CD44-229ENST00000528672 PAF1Q8N7H5 531 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 GLB1L3Q8NCI6 653 aaPredicted RBP4.03□□□□□ -1.76
CD44-229ENST00000528672 PGBD4Q96DM1 585 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 CCDC138Q96M89 665 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 TBCBQ99426 244 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 ACE2Q9BYF1 805 aaPredicted RBP4.03□□□□□ -1.76
CD44-229ENST00000528672 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.03□□□□□ -1.76
CD44-229ENST00000528672 HAPLN2Q9GZV7 340 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 TMEM168Q9H0V1 697 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 ADAM7Q9H2U9 754 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 AGO3Q9H9G7 860 aaKnown RBP4.03□□□□□ -1.76
CD44-229ENST00000528672 BARX1Q9HBU1 254 aaPredicted RBP4.03□□□□□ -1.76
CD44-229ENST00000528672 PNMA2Q9UL42 364 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 FAM184BQ9ULE4 1060 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 SYNPO2Q9UMS6 1093 aa4.03□□□□□ -1.76
CD44-229ENST00000528672 RBM8AQ9Y5S9 174 aaKnown RBP4.03□□□□□ -1.76
CD44-229ENST00000528672 ZMYM3Q14202 1370 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 CLSPNQ9HAW4 1339 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 A0A0G2JNJ9 132 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 KLRG2A4D1S0 409 aaPredicted RBP4.02□□□□□ -1.77
CD44-229ENST00000528672 CCDC154A6NI56 674 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 F5H423 210 aaPredicted RBP4.02□□□□□ -1.77
CD44-229ENST00000528672 HTRA2O43464 458 aaPredicted RBP4.02□□□□□ -1.77
CD44-229ENST00000528672 B4GALT3O60512 393 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 SEC24DO94855 1032 aaPredicted RBP4.02□□□□□ -1.77
CD44-229ENST00000528672 ALDH2P05091 517 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 GAAP10253 952 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 GSPT1P15170 499 aaKnown RBP4.02□□□□□ -1.77
CD44-229ENST00000528672 FPR1P21462 350 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 HTR1BP28222 390 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 SLC6A9P48067 706 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 MRE11P49959 708 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 POU5F1BQ06416 359 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 NOMO1Q15155 1222 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 ADRM1Q16186 407 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 FAM214AQ32MH5 1076 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 ANO6Q4KMQ2 910 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 MYLK4Q86YV6 388 aaPredicted RBP4.02□□□□□ -1.77
CD44-229ENST00000528672 KIAA0319LQ8IZA0 1049 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 CPXCR1Q8N123 301 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 TTC9BQ8N6N2 239 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 OR14C36Q8NHC7 312 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 RSAD2Q8WXG1 361 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 FATE1Q969F0 183 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 AJUBAQ96IF1 538 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 RPL10LQ96L21 214 aaKnown RBP4.02□□□□□ -1.77
CD44-229ENST00000528672 SCLT1Q96NL6 688 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 NT5C1BQ96P26 610 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 SELENOOQ9BVL4 669 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 APOL5Q9BWW9 433 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 B3GNT5Q9BYG0 378 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 KATNBL1Q9H079 304 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 NUP62CLQ9H1M0 184 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 BHMT2Q9H2M3 363 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 TLR9Q9NR96 1032 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 Q9UFV3 132 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 SCOCQ9UIL1 159 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 ADAM29Q9UKF5 820 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 L1RE1Q9UN81 338 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 POLHQ9Y253 713 aa4.02□□□□□ -1.77
CD44-229ENST00000528672 CAPN8A6NHC0 703 aa4.01□□□□□ -1.77
CD44-229ENST00000528672 MGEA5O60502 916 aa4.01□□□□□ -1.77
CD44-229ENST00000528672 B4GALT4O60513 344 aa4.01□□□□□ -1.77
CD44-229ENST00000528672 NBNO60934 754 aa4.01□□□□□ -1.77
CD44-229ENST00000528672 PLATP00750 562 aa4.01□□□□□ -1.77
CD44-229ENST00000528672 HMGCRP04035 888 aa4.01□□□□□ -1.77
CD44-229ENST00000528672 PTMSP20962 102 aa4.01□□□□□ -1.77
CD44-229ENST00000528672 PEX2P28328 305 aa4.01□□□□□ -1.77
CD44-229ENST00000528672 TM4SF4P48230 202 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms