RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 WDR6Q9NNW5 1121 aaKnown RBP28.56■■■□□ 2.16
TRIM3-206ENST00000528227 SNTG2Q9NY99 539 aa28.56■■■□□ 2.16
TRIM3-206ENST00000528227 ACKR2O00590 384 aa28.55■■■□□ 2.16
TRIM3-206ENST00000528227 PTGESO14684 152 aa28.55■■■□□ 2.16
TRIM3-206ENST00000528227 N4BP1O75113 896 aaKnown RBP28.55■■■□□ 2.16
TRIM3-206ENST00000528227 TADA2AO75478 443 aa28.55■■■□□ 2.16
TRIM3-206ENST00000528227 EDN1P05305 212 aa28.55■■■□□ 2.16
TRIM3-206ENST00000528227 SPATA31D3P0C874 917 aa28.55■■■□□ 2.16
TRIM3-206ENST00000528227 FXR2P51116 673 aaKnown RBP eCLIP28.55■■■□□ 2.16
TRIM3-206ENST00000528227 GNL2Q13823 731 aaKnown RBP28.55■■■□□ 2.16
TRIM3-206ENST00000528227 SPATA31D4Q6ZUB0 917 aa28.55■■■□□ 2.16
TRIM3-206ENST00000528227 DEPTORQ8TB45 409 aa28.55■■■□□ 2.16
TRIM3-206ENST00000528227 RIN2Q8WYP3 895 aaPredicted RBP28.55■■■□□ 2.16
TRIM3-206ENST00000528227 KIF2CQ99661 725 aa28.55■■■□□ 2.16
TRIM3-206ENST00000528227 PLEKHA4Q9H4M7 779 aa28.55■■■□□ 2.16
TRIM3-206ENST00000528227 USP20Q9Y2K6 914 aa28.55■■■□□ 2.16
TRIM3-206ENST00000528227 MTCL1Q9Y4B5 1905 aaKnown RBP28.55■■■□□ 2.16
TRIM3-206ENST00000528227 CLUHO75153 1309 aa28.54■■■□□ 2.16
TRIM3-206ENST00000528227 SF3B1O75533 1304 aaKnown RBP eCLIP28.54■■■□□ 2.16
TRIM3-206ENST00000528227 TGM5O43548 720 aa28.54■■■□□ 2.16
TRIM3-206ENST00000528227 CCT6AP40227 531 aaKnown RBP28.54■■■□□ 2.16
TRIM3-206ENST00000528227 CREMQ03060 361 aa28.54■■■□□ 2.16
TRIM3-206ENST00000528227 TDGQ13569 410 aa28.54■■■□□ 2.16
TRIM3-206ENST00000528227 NBR1Q14596 966 aa28.54■■■□□ 2.16
TRIM3-206ENST00000528227 PPP2R5AQ15172 486 aa28.54■■■□□ 2.16
TRIM3-206ENST00000528227 TMEM132AQ24JP5 1023 aa28.54■■■□□ 2.16
TRIM3-206ENST00000528227 TMEM105Q8N8V8 129 aa28.54■■■□□ 2.16
TRIM3-206ENST00000528227 FAM184AQ8NB25 1140 aa28.54■■■□□ 2.16
TRIM3-206ENST00000528227 ZNF707Q96C28 371 aaPredicted RBP28.54■■■□□ 2.16
TRIM3-206ENST00000528227 IRF2BPLQ9H1B7 796 aa28.54■■■□□ 2.16
TRIM3-206ENST00000528227 KCNK12Q9HB15 430 aa28.54■■■□□ 2.16
TRIM3-206ENST00000528227 SH2B1Q9NRF2 756 aaPredicted RBP28.54■■■□□ 2.16
TRIM3-206ENST00000528227 NOL7Q9UMY1 257 aaKnown RBP28.54■■■□□ 2.16
TRIM3-206ENST00000528227 CASTOR2A6NHX0 329 aa28.53■■■□□ 2.16
TRIM3-206ENST00000528227 RECQL4O94761 1208 aa28.53■■■□□ 2.16
TRIM3-206ENST00000528227 LIG1P18858 919 aa28.53■■■□□ 2.16
TRIM3-206ENST00000528227 LILRA6Q6PI73 481 aa28.53■■■□□ 2.16
TRIM3-206ENST00000528227 GLYCTKQ8IVS8 523 aa28.53■■■□□ 2.16
TRIM3-206ENST00000528227 SMG7Q92540 1137 aaKnown RBP28.53■■■□□ 2.16
TRIM3-206ENST00000528227 STAMQ92783 540 aa28.53■■■□□ 2.16
TRIM3-206ENST00000528227 ADPGKQ9BRR6 497 aa28.53■■■□□ 2.16
TRIM3-206ENST00000528227 KIFC3Q9BVG8 833 aa28.53■■■□□ 2.16
TRIM3-206ENST00000528227 CXCL16Q9H2A7 254 aa28.53■■■□□ 2.16
TRIM3-206ENST00000528227 BHMT2Q9H2M3 363 aa28.53■■■□□ 2.16
TRIM3-206ENST00000528227 FAM86C1Q9NVL1 165 aa28.53■■■□□ 2.16
TRIM3-206ENST00000528227 GALR2O43603 387 aaPredicted RBP28.52■■■□□ 2.16
TRIM3-206ENST00000528227 THP07101 528 aa28.52■■■□□ 2.16
TRIM3-206ENST00000528227 RPL17P18621 184 aaKnown RBP28.52■■■□□ 2.16
TRIM3-206ENST00000528227 NAB2Q15742 525 aa28.52■■■□□ 2.16
TRIM3-206ENST00000528227 RTP2Q5QGT7 225 aa28.52■■■□□ 2.16
TRIM3-206ENST00000528227 EEF1DP3Q658K8 133 aa28.52■■■□□ 2.16
TRIM3-206ENST00000528227 ASTLQ6HA08 431 aaPredicted RBP28.52■■■□□ 2.16
TRIM3-206ENST00000528227 NT5C3AQ9H0P0 336 aa28.52■■■□□ 2.16
TRIM3-206ENST00000528227 MFSD1Q9H3U5 465 aa28.52■■■□□ 2.16
TRIM3-206ENST00000528227 POLD4Q9HCU8 107 aa28.52■■■□□ 2.16
TRIM3-206ENST00000528227 ZDHHC7Q9NXF8 308 aa28.52■■■□□ 2.16
TRIM3-206ENST00000528227 IGSF9Q9P2J2 1179 aa28.52■■■□□ 2.16
TRIM3-206ENST00000528227 LRWD1Q9UFC0 647 aa28.52■■■□□ 2.16
TRIM3-206ENST00000528227 DUSP12Q9UNI6 340 aa28.52■■■□□ 2.16
TRIM3-206ENST00000528227 KIF4AO95239 1232 aa28.51■■■□□ 2.15
TRIM3-206ENST00000528227 U2AF2P26368 475 aaKnown RBP eCLIP28.51■■■□□ 2.15
TRIM3-206ENST00000528227 GBP2P32456 591 aaPredicted RBP28.51■■■□□ 2.15
TRIM3-206ENST00000528227 PRSS55Q6UWB4 352 aaPredicted RBP28.51■■■□□ 2.15
TRIM3-206ENST00000528227 HASPINQ8TF76 798 aa28.51■■■□□ 2.15
TRIM3-206ENST00000528227 IFT74Q96LB3 600 aa28.51■■■□□ 2.15
TRIM3-206ENST00000528227 KIAA1024Q9UPX6 916 aa28.51■■■□□ 2.15
TRIM3-206ENST00000528227 H0Y858 1186 aa28.5■■■□□ 2.15
TRIM3-206ENST00000528227 EFNA5P52803 228 aa28.5■■■□□ 2.15
TRIM3-206ENST00000528227 PDIA5Q14554 519 aa28.5■■■□□ 2.15
TRIM3-206ENST00000528227 IGSF22Q8N9C0 903 aa28.5■■■□□ 2.15
TRIM3-206ENST00000528227 KIFAP3Q92845 792 aa28.5■■■□□ 2.15
TRIM3-206ENST00000528227 ATOH1Q92858 354 aaPredicted RBP28.5■■■□□ 2.15
TRIM3-206ENST00000528227 EPS15L1Q9UBC2 864 aa28.5■■■□□ 2.15
TRIM3-206ENST00000528227 TOB1P50616 345 aaPredicted RBP28.49■■■□□ 2.15
TRIM3-206ENST00000528227 CLCN5P51795 746 aa28.49■■■□□ 2.15
TRIM3-206ENST00000528227 DCAF4L1Q3SXM0 396 aa28.49■■■□□ 2.15
TRIM3-206ENST00000528227 FAM171A1Q5VUB5 890 aa28.49■■■□□ 2.15
TRIM3-206ENST00000528227 PIK3R5Q8WYR1 880 aa28.49■■■□□ 2.15
TRIM3-206ENST00000528227 MYADMQ96S97 322 aa28.49■■■□□ 2.15
TRIM3-206ENST00000528227 TTPALQ9BTX7 342 aa28.49■■■□□ 2.15
TRIM3-206ENST00000528227 PRKD2Q9BZL6 878 aa28.49■■■□□ 2.15
TRIM3-206ENST00000528227 PIDD1Q9HB75 910 aa28.49■■■□□ 2.15
TRIM3-206ENST00000528227 DDX19AQ9NUU7 478 aaKnown RBP28.49■■■□□ 2.15
TRIM3-206ENST00000528227 GDAQ9Y2T3 454 aa28.49■■■□□ 2.15
TRIM3-206ENST00000528227 PTGDRQ13258 359 aa28.48■■■□□ 2.15
TRIM3-206ENST00000528227 NT5DC1Q5TFE4 455 aa28.48■■■□□ 2.15
TRIM3-206ENST00000528227 CWF19L1Q69YN2 538 aaKnown RBP28.48■■■□□ 2.15
TRIM3-206ENST00000528227 SNX29Q8TEQ0 813 aa28.48■■■□□ 2.15
TRIM3-206ENST00000528227 CLSTN3Q9BQT9 956 aa28.48■■■□□ 2.15
TRIM3-206ENST00000528227 DAXXQ9UER7 740 aaPredicted RBP28.48■■■□□ 2.15
TRIM3-206ENST00000528227 PCDHB6Q9Y5E3 794 aa28.48■■■□□ 2.15
TRIM3-206ENST00000528227 STK24Q9Y6E0 443 aa28.48■■■□□ 2.15
TRIM3-206ENST00000528227 ZMYND10O75800 440 aa28.47■■■□□ 2.15
TRIM3-206ENST00000528227 ATF7IP2Q5U623 682 aa28.47■■■□□ 2.15
TRIM3-206ENST00000528227 CEP57Q86XR8 500 aa28.47■■■□□ 2.15
TRIM3-206ENST00000528227 LNX1Q8TBB1 728 aaPredicted RBP28.47■■■□□ 2.15
TRIM3-206ENST00000528227 RSAD2Q8WXG1 361 aa28.47■■■□□ 2.15
TRIM3-206ENST00000528227 RAB34Q9BZG1 259 aa28.47■■■□□ 2.15
TRIM3-206ENST00000528227 FBXW11Q9UKB1 542 aa28.47■■■□□ 2.15
TRIM3-206ENST00000528227 NARSO43776 548 aaKnown RBP28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms