RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 THP07101 528 aa21.2■□□□□ 0.98
CAPN1-211ENST00000527739 MYBP10242 640 aa21.2■□□□□ 0.98
CAPN1-211ENST00000527739 GLUD2P49448 558 aa21.2■□□□□ 0.98
CAPN1-211ENST00000527739 CUL4AQ13619 759 aa21.2■□□□□ 0.98
CAPN1-211ENST00000527739 DCAF4L1Q3SXM0 396 aa21.2■□□□□ 0.98
CAPN1-211ENST00000527739 TRIM67Q6ZTA4 783 aa21.2■□□□□ 0.98
CAPN1-211ENST00000527739 BRAPQ7Z569 592 aa21.2■□□□□ 0.98
CAPN1-211ENST00000527739 DAW1Q8N136 415 aa21.2■□□□□ 0.98
CAPN1-211ENST00000527739 RASSF8Q8NHQ8 419 aa21.2■□□□□ 0.98
CAPN1-211ENST00000527739 B3GALT6Q96L58 329 aa21.2■□□□□ 0.98
CAPN1-211ENST00000527739 RIPOR3Q96MK2 946 aa21.2■□□□□ 0.98
CAPN1-211ENST00000527739 BACH2Q9BYV9 841 aa21.2■□□□□ 0.98
CAPN1-211ENST00000527739 KCNH6Q9H252 994 aa21.2■□□□□ 0.98
CAPN1-211ENST00000527739 FOXD4L1Q9NU39 408 aa21.2■□□□□ 0.98
CAPN1-211ENST00000527739 TMEM221A6NGB7 291 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 M0R296 226 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 SLC16A4O15374 487 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 PLA2G4BP0C869 781 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 PDCP20941 246 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 UBA7P41226 1012 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 ZXDAP98168 799 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 TUSC3Q13454 348 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 DHX8Q14562 1220 aaKnown RBP21.19■□□□□ 0.98
CAPN1-211ENST00000527739 ATAT1Q5SQI0 421 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 FUT10Q6P4F1 479 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 TMC5Q6UXY8 1006 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 ZBTB33Q86T24 672 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 PRSS33Q8NF86 280 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 CALML4Q96GE6 196 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 PHOX2BQ99453 314 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 TCHPQ9BT92 498 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 ADAM28Q9UKQ2 775 aa21.19■□□□□ 0.98
CAPN1-211ENST00000527739 RBM19Q9Y4C8 960 aaKnown RBP21.19■□□□□ 0.98
CAPN1-211ENST00000527739 LILRB3O75022 631 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 BMP15O95972 392 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 MTHFRP42898 656 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 CLCN4P51793 760 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 OSTNP61366 133 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 HSP90AA2PQ14568 343 aaPredicted RBP21.18■□□□□ 0.98
CAPN1-211ENST00000527739 SF3A1Q15459 793 aaKnown RBP21.18■□□□□ 0.98
CAPN1-211ENST00000527739 HYIQ5T013 277 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 IER5LQ5T953 404 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 SYT2Q8N9I0 419 aaPredicted RBP21.18■□□□□ 0.98
CAPN1-211ENST00000527739 HASPINQ8TF76 798 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 NECTIN4Q96NY8 510 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 PAAF1Q9BRP4 392 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 TIPINQ9BVW5 301 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 MRPL4Q9BYD3 311 aaKnown RBP21.18■□□□□ 0.98
CAPN1-211ENST00000527739 GPR62Q9BZJ7 368 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 CXCL16Q9H2A7 254 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 POMKQ9H5K3 350 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 TNFSF13BQ9Y275 285 aa21.18■□□□□ 0.98
CAPN1-211ENST00000527739 NPHP3-ACAD11A0A0J9YXS1 232 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 PTGESO14684 152 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 TEX28O15482 410 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 ADH1AP07327 375 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 HARSP12081 509 aaKnown RBP21.17■□□□□ 0.98
CAPN1-211ENST00000527739 GUCY2CP25092 1073 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 SMTNP53814 917 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 CACNB1Q02641 598 aaPredicted RBP21.17■□□□□ 0.98
CAPN1-211ENST00000527739 MAPK7Q13164 816 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 USP41Q3LFD5 358 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 ZNF568Q3ZCX4 644 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 KIAA0319Q5VV43 1072 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 GLYCTKQ8IVS8 523 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 RIN2Q8WYP3 895 aaPredicted RBP21.17■□□□□ 0.98
CAPN1-211ENST00000527739 PBXIP1Q96AQ6 731 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 AK8Q96MA6 479 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 ACO2Q99798 780 aaKnown RBP21.17■□□□□ 0.98
CAPN1-211ENST00000527739 TARS2Q9BW92 718 aaKnown RBP21.17■□□□□ 0.98
CAPN1-211ENST00000527739 TMEM134Q9H6X4 195 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 C17orf75Q9HAS0 396 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 NR2E1Q9Y466 385 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 PHLPP2Q6ZVD8 1323 aa21.17■□□□□ 0.98
CAPN1-211ENST00000527739 ZMYM2Q9UBW7 1377 aa21.16■□□□□ 0.98
CAPN1-211ENST00000527739 YARSP54577 528 aaKnown RBP21.16■□□□□ 0.98
CAPN1-211ENST00000527739 DSG1Q02413 1049 aa21.16■□□□□ 0.98
CAPN1-211ENST00000527739 STRN3Q13033 797 aa21.16■□□□□ 0.98
CAPN1-211ENST00000527739 TMEM119Q4V9L6 283 aa21.16■□□□□ 0.98
CAPN1-211ENST00000527739 GLRA4Q5JXX5 417 aa21.16■□□□□ 0.98
CAPN1-211ENST00000527739 BMP8AQ7Z5Y6 402 aa21.16■□□□□ 0.98
CAPN1-211ENST00000527739 CEP57Q86XR8 500 aa21.16■□□□□ 0.98
CAPN1-211ENST00000527739 PALB2Q86YC2 1186 aa21.16■□□□□ 0.98
CAPN1-211ENST00000527739 KCTD17Q8N5Z5 321 aa21.16■□□□□ 0.98
CAPN1-211ENST00000527739 CCDC94Q9BW85 323 aaPredicted RBP21.16■□□□□ 0.98
CAPN1-211ENST00000527739 SFXN1Q9H9B4 322 aa21.16■□□□□ 0.98
CAPN1-211ENST00000527739 KCNG1Q9UIX4 513 aa21.16■□□□□ 0.98
CAPN1-211ENST00000527739 SF3B1O75533 1304 aaKnown RBP eCLIP21.15■□□□□ 0.98
CAPN1-211ENST00000527739 SPATA31D3P0C874 917 aa21.15■□□□□ 0.98
CAPN1-211ENST00000527739 PLS3P13797 630 aa21.15■□□□□ 0.98
CAPN1-211ENST00000527739 SLC12A3P55017 1021 aa21.15■□□□□ 0.98
CAPN1-211ENST00000527739 ELMSAN1Q6PJG2 1045 aa21.15■□□□□ 0.98
CAPN1-211ENST00000527739 SPATA31D4Q6ZUB0 917 aa21.15■□□□□ 0.98
CAPN1-211ENST00000527739 CDT1Q9H211 546 aa21.15■□□□□ 0.98
CAPN1-211ENST00000527739 MAN1C1Q9NR34 630 aa21.15■□□□□ 0.98
CAPN1-211ENST00000527739 ARHGAP28Q9P2N2 729 aa21.15■□□□□ 0.98
CAPN1-211ENST00000527739 KIF4AO95239 1232 aa21.14■□□□□ 0.97
CAPN1-211ENST00000527739 GLUD1P00367 558 aa21.14■□□□□ 0.97
CAPN1-211ENST00000527739 KRT18P05783 430 aaKnown RBP21.14■□□□□ 0.97
CAPN1-211ENST00000527739 RPL17P18621 184 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms