RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 FAM182BQ5T319 152 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 MEX3CQ5U5Q3 659 aaKnown RBP6.21□□□□□ -1.42
CD44-225ENST00000527326 CDKAL1Q5VV42 579 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 SNX30Q5VWJ9 437 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 RESP18Q5W5W9 173 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 ANO1Q5XXA6 986 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 NXNQ6DKJ4 435 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 KLHL35Q6PF15 583 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 SLC4A10Q6U841 1118 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 LRRC74BQ6ZQY2 392 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 DHX32Q7L7V1 743 aaKnown RBP6.21□□□□□ -1.42
CD44-225ENST00000527326 APTXQ7Z2E3 356 aaKnown RBP6.21□□□□□ -1.42
CD44-225ENST00000527326 ALYREFQ86V81 257 aaKnown RBP6.21□□□□□ -1.42
CD44-225ENST00000527326 TREML1Q86YW5 311 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 GRAMD2AQ8IUY3 354 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 TNS4Q8IZW8 715 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 RIBC1Q8N443 379 aaPredicted RBP6.21□□□□□ -1.42
CD44-225ENST00000527326 KIF2BQ8N4N8 673 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 ZNF713Q8N859 430 aaPredicted RBP6.21□□□□□ -1.42
CD44-225ENST00000527326 FAM133AQ8N9E0 248 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 FAM13CQ8NE31 585 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 DDHD1Q8NEL9 900 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 TBC1D16Q8TBP0 767 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 GIPC2Q8TF65 315 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 CPLX3Q8WVH0 158 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 NELFBQ8WX92 580 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 SCG3Q8WXD2 468 aaKnown RBP6.21□□□□□ -1.42
CD44-225ENST00000527326 CASKIN2Q8WXE0 1202 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 EME1Q96AY2 570 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 PGM2Q96G03 612 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 ZNF184Q99676 751 aaPredicted RBP6.21□□□□□ -1.42
CD44-225ENST00000527326 HAUS7Q99871 368 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 DDX23Q9BUQ8 820 aaKnown RBP6.21□□□□□ -1.42
CD44-225ENST00000527326 C2orf49Q9BVC5 232 aaPredicted RBP6.21□□□□□ -1.42
CD44-225ENST00000527326 KLHL4Q9C0H6 718 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 SUV39H2Q9H5I1 410 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 AS3MTQ9HBK9 375 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 EPB41L5Q9HCM4 733 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 POLD4Q9HCU8 107 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 NEUROD4Q9HD90 331 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 IL20Q9NYY1 176 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 FAM153AQ9UHL3 310 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 KLF15Q9UIH9 416 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 MAN1B1Q9UKM7 699 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 ANGPTL2Q9UKU9 493 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 HCN2Q9UL51 889 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 FAF1Q9UNN5 650 aaPredicted RBP6.21□□□□□ -1.42
CD44-225ENST00000527326 PCDHA5Q9Y5H7 936 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 PCDH11XQ9BZA7 1347 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 SALL1Q9NSC2 1324 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 PXDNLA1KZ92 1463 aa6.21□□□□□ -1.42
CD44-225ENST00000527326 RFX7Q2KHR2 1363 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 GNAT3A8MTJ3 354 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 FAM25EA8MYX2 175 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 TMEM114B3SHH9 223 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 TRAFD1O14545 582 aaPredicted RBP6.2□□□□□ -1.42
CD44-225ENST00000527326 GNB5O14775 395 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 ZNF185O15231 689 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 TEX33O43247 280 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 ADCY3O60266 1144 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 CNOT3O75175 753 aaKnown RBP6.2□□□□□ -1.42
CD44-225ENST00000527326 DGKIO75912 1065 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 AFPP02771 609 aaKnown RBP6.2□□□□□ -1.42
CD44-225ENST00000527326 LDHBP07195 334 aaKnown RBP6.2□□□□□ -1.42
CD44-225ENST00000527326 FAM157BP0CG42 384 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 MYBP10242 640 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 CDK4P11802 303 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 CHN1P15882 459 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 CCNCP24863 283 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 ATICP31939 592 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 PPARGP37231 505 aaPredicted RBP6.2□□□□□ -1.42
CD44-225ENST00000527326 GPC3P51654 580 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 BASP1P80723 227 aaKnown RBP6.2□□□□□ -1.42
CD44-225ENST00000527326 E2F2Q14209 437 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 NR1D2Q14995 579 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 TEAD4Q15561 434 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 FAM209AQ5JX71 171 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 TBCELQ5QJ74 424 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 FYB2Q5VWT5 728 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 LRRC69Q6ZNQ3 347 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 TMTC3Q6ZXV5 915 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 ACAD11Q709F0 780 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 INTS8Q75QN2 995 aaKnown RBP6.2□□□□□ -1.42
CD44-225ENST00000527326 TAOK1Q7L7X3 1001 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 HS2ST1Q7LGA3 356 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 KRT27Q7Z3Y8 459 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 METTL16Q86W50 562 aaKnown RBP6.2□□□□□ -1.42
CD44-225ENST00000527326 SFR1Q86XK3 245 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 ANKRD13AQ8IZ07 590 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 C8orf58Q8NAV2 365 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 ZDHHC1Q8WTX9 485 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 PYROXD1Q8WU10 500 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 HPS3Q969F9 1004 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 MED30Q96HR3 178 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 COX4I2Q96KJ9 171 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 DNAJC7Q99615 494 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 UBAC1Q9BSL1 405 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 ZNF304Q9HCX3 659 aa6.2□□□□□ -1.42
CD44-225ENST00000527326 INTS9Q9NV88 658 aaKnown RBP6.2□□□□□ -1.42
CD44-225ENST00000527326 GID8Q9NWU2 228 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms