RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 CDCA2Q69YH5 1023 aaPredicted RBP10.56□□□□□ -0.72
USP35-201ENST00000526425 OTUD5Q96G74 571 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 UBE2OQ9C0C9 1292 aaKnown RBP10.56□□□□□ -0.72
USP35-201ENST00000526425 RBM12Q9NTZ6 932 aaKnown RBP10.56□□□□□ -0.72
USP35-201ENST00000526425 COL20A1Q9P218 1284 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 PITPNM2Q9BZ72 1349 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 ZSCAN5CA6NGD5 496 aaPredicted RBP10.56□□□□□ -0.72
USP35-201ENST00000526425 DCAF8L1A6NGE4 600 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 ATMINO43313 823 aaPredicted RBP10.56□□□□□ -0.72
USP35-201ENST00000526425 ATP9AO75110 1047 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 NR3C2P08235 984 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 SEZ6Q53EL9 994 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 KLHDC7AQ5VTJ3 777 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 SYTL5Q8TDW5 730 aaPredicted RBP10.56□□□□□ -0.72
USP35-201ENST00000526425 IQCDQ96DY2 449 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 FAM213AQ9BRX8 229 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 INTS2Q9H0H0 1204 aaKnown RBP10.56□□□□□ -0.72
USP35-201ENST00000526425 TUFT1Q9NNX1 390 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 ACP6Q9NPH0 428 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 FAM114A2Q9NRY5 505 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 AGPAT3Q9NRZ7 376 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 ABCF3Q9NUQ8 709 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 DMGDHQ9UI17 866 aaKnown RBP10.56□□□□□ -0.72
USP35-201ENST00000526425 ECM29Q5VYK3 1845 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 NOP56O00567 594 aaKnown RBP10.56□□□□□ -0.72
USP35-201ENST00000526425 AHCYL1O43865 530 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 CALCAP01258 141 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 COPB2P35606 906 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 FMO5P49326 533 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 VPS41P49754 854 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 SLC18A3Q16572 532 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 EDRF1Q3B7T1 1238 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 OTUD6AQ7L8S5 288 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 TRAPPC11Q7Z392 1133 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 ZNF571Q7Z3V5 609 aaPredicted RBP10.56□□□□□ -0.72
USP35-201ENST00000526425 FRMD5Q7Z6J6 570 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 ZBTB33Q86T24 672 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 WDR75Q8IWA0 830 aaKnown RBP10.56□□□□□ -0.72
USP35-201ENST00000526425 METTL13Q8N6R0 699 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 MORC4Q8TE76 937 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 TMEM143Q96AN5 459 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 PI4K2AQ9BTU6 479 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 POLR3CQ9BUI4 534 aaPredicted RBP10.56□□□□□ -0.72
USP35-201ENST00000526425 ZFATQ9P243 1243 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 AMFRQ9UKV5 643 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 HPCAL4Q9UM19 191 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 LAMB1P07942 1786 aa10.56□□□□□ -0.72
USP35-201ENST00000526425 WDR64B1ANS9 1081 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 C19orf81C9J6K1 198 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 STRN3Q13033 797 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 C2CD6Q53TS8 623 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 FAM228AQ86W67 206 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 ARHGAP18Q8N392 663 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 CCDC63Q8NA47 563 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 DEPTORQ8TB45 409 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 ZNF473Q8WTR7 871 aaKnown RBP10.55□□□□□ -0.72
USP35-201ENST00000526425 LENG9Q96B70 501 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 ARL8AQ96BM9 186 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 WNK4Q96J92 1243 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 CCT8L2Q96SF2 557 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 SGIP1Q9BQI5 828 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 DDX47Q9H0S4 455 aaKnown RBP10.55□□□□□ -0.72
USP35-201ENST00000526425 WRAP73Q9P2S5 460 aaPredicted RBP10.55□□□□□ -0.72
USP35-201ENST00000526425 SALL4Q9UJQ4 1053 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 VAV3Q9UKW4 847 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 PAIP2BQ9ULR5 123 aaKnown RBP10.55□□□□□ -0.72
USP35-201ENST00000526425 ITM2BQ9Y287 266 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 SMCHD1A6NHR9 2005 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 DPPA5A6NC42 116 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 ADM5C9JUS6 153 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 PTPRAP18433 802 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 CCND2P30279 289 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 TUFMP49411 452 aaKnown RBP10.55□□□□□ -0.72
USP35-201ENST00000526425 VAMP7P51809 220 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 MEA1Q16626 185 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 P3H1Q32P28 736 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 XXYLT1Q8NBI6 393 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 BAP1Q92560 729 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 ARPC5LQ9BPX5 153 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 KCTD10Q9H3F6 313 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 HOXC10Q9NYD6 342 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 NOP53Q9NZM5 478 aaKnown RBP10.55□□□□□ -0.72
USP35-201ENST00000526425 PPP1R9AQ9ULJ8 1098 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 RIPK3Q9Y572 518 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 PPP2R3BQ9Y5P8 575 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 GOLGA6L10A0A0M3HER8 536 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 A0A1W2PQJ5 194 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 SPDYE5A6NIY4 337 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 PSMD10O75832 226 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 SRGAP2CP0DJJ0 459 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 FDX1P10109 184 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 ZNF24P17028 368 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 SESN3P58005 492 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 GRM1Q13255 1194 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 ZNF394Q53GI3 561 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 ZBED3Q96IU2 234 aaPredicted RBP10.55□□□□□ -0.72
USP35-201ENST00000526425 TEPSINQ96N21 525 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 RANBP17Q9H2T7 1088 aaKnown RBP10.55□□□□□ -0.72
USP35-201ENST00000526425 PLCB1Q9NQ66 1216 aa10.55□□□□□ -0.72
USP35-201ENST00000526425 TOPORSQ9NS56 1045 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms