RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 CCDC26Q8TAB7 109 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 FBLIM1Q8WUP2 373 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 SNRNP27Q8WVK2 155 aaKnown RBP5.56□□□□□ -1.52
CD44-218ENST00000525469 EZH1Q92800 747 aaPredicted RBP5.56□□□□□ -1.52
CD44-218ENST00000525469 SMARCE1Q969G3 411 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 ATG4CQ96DT6 458 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 MRPL38Q96DV4 380 aaKnown RBP5.56□□□□□ -1.52
CD44-218ENST00000525469 RSRC1Q96IZ7 334 aaKnown RBP5.56□□□□□ -1.52
CD44-218ENST00000525469 FRMD6Q96NE9 622 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 TSPAN18Q96SJ8 248 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 OSBPL9Q96SU4 736 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 RAD9AQ99638 391 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 KIF2CQ99661 725 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 CRACR2AQ9BSW2 395 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 ATXN3LQ9H3M9 355 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 PIDD1Q9HB75 910 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 SERPINB13Q9UIV8 391 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 GGA2Q9UJY4 613 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.56□□□□□ -1.52
CD44-218ENST00000525469 MICAL3Q7RTP6 2002 aa5.56□□□□□ -1.52
CD44-218ENST00000525469 MYO5AQ9Y4I1 1855 aaKnown RBP5.56□□□□□ -1.52
CD44-218ENST00000525469 TNKSO95271 1327 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 IL16Q14005 1332 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 DCHS1Q96JQ0 3298 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 LCHNA4D1U4 455 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 SRRM3A6NNA2 597 aaPredicted RBP5.55□□□□□ -1.52
CD44-218ENST00000525469 LIN7AO14910 233 aaPredicted RBP5.55□□□□□ -1.52
CD44-218ENST00000525469 BCAR3O75815 825 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 NEBLO76041 1014 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 CIAO1O76071 339 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 SNUPNO95149 360 aaKnown RBP5.55□□□□□ -1.52
CD44-218ENST00000525469 GSTP1P09211 210 aaKnown RBP5.55□□□□□ -1.52
CD44-218ENST00000525469 CYP2C9P11712 490 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 IMPDH2P12268 514 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 IL15P40933 162 aaPredicted RBP5.55□□□□□ -1.52
CD44-218ENST00000525469 NBL1P41271 181 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 ASPAP45381 313 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 TIMM10P62072 90 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 TNFAIP2Q03169 654 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 SIGLEC14Q08ET2 396 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 G3BP1Q13283 466 aaKnown RBP eCLIP5.55□□□□□ -1.52
CD44-218ENST00000525469 BFSP2Q13515 415 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 PUM1Q14671 1186 aaKnown RBP eCLIP5.55□□□□□ -1.52
CD44-218ENST00000525469 TMEM132BQ14DG7 1078 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 SEPT2Q15019 361 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 SMAD2Q15796 467 aaKnown RBP5.55□□□□□ -1.52
CD44-218ENST00000525469 CLUL1Q15846 466 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 FSCN1Q16658 493 aaKnown RBP5.55□□□□□ -1.52
CD44-218ENST00000525469 ST3GAL2Q16842 350 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 ALDH1L2Q3SY69 923 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 PREPLQ4J6C6 727 aaPredicted RBP5.55□□□□□ -1.52
CD44-218ENST00000525469 ZC3H12AQ5D1E8 599 aaKnown RBP5.55□□□□□ -1.52
CD44-218ENST00000525469 TCEAL5Q5H9L2 206 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 TATDN1Q6P1N9 297 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 MAMDC4Q6UXC1 1216 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 ATG9AQ7Z3C6 839 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 TTC6Q86TZ1 520 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 LRRC8AQ8IWT6 810 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 SPATA5Q8NB90 893 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 DRAXINQ8NBI3 349 aaPredicted RBP5.55□□□□□ -1.52
CD44-218ENST00000525469 KCNG4Q8TDN1 519 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 LZICQ8WZA0 190 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 P3H4Q92791 437 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 GTF3C6Q969F1 213 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 SAAL1Q96ER3 474 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 IL17RAQ96F46 866 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 NEUROD6Q96NK8 337 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 TRIM5Q9C035 493 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 ALDH8A1Q9H2A2 487 aaPredicted RBP5.55□□□□□ -1.52
CD44-218ENST00000525469 NSUN3Q9H649 340 aaKnown RBP5.55□□□□□ -1.52
CD44-218ENST00000525469 SH2D4AQ9H788 454 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 ORC3Q9UBD5 711 aaPredicted RBP5.55□□□□□ -1.52
CD44-218ENST00000525469 PYCARDQ9ULZ3 195 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 AKAP2Q9Y2D5 859 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 CTDP1Q9Y5B0 961 aaPredicted RBP5.55□□□□□ -1.52
CD44-218ENST00000525469 ACTL7BQ9Y614 415 aa5.55□□□□□ -1.52
CD44-218ENST00000525469 NAV1Q8NEY1 1877 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 LINC01553A4QN01 128 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 GOLGA6L4A6NEF3 574 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 PDLIM1O00151 329 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 DYNC1LI2O43237 492 aaPredicted RBP5.54□□□□□ -1.52
CD44-218ENST00000525469 MBTPS2O43462 519 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 KINO60870 393 aaKnown RBP5.54□□□□□ -1.52
CD44-218ENST00000525469 VAMP4O75379 141 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 LUC7L3O95232 432 aaKnown RBP5.54□□□□□ -1.52
CD44-218ENST00000525469 IQCF3P0C7M6 154 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 PECAM1P16284 738 aaPredicted RBP5.54□□□□□ -1.52
CD44-218ENST00000525469 PDCP20941 246 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 ZNF75DP51815 510 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 VCPP55072 806 aaKnown RBP5.54□□□□□ -1.52
CD44-218ENST00000525469 WDR5P61964 334 aaKnown RBP5.54□□□□□ -1.52
CD44-218ENST00000525469 PSMC6P62333 389 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 ID3Q02535 119 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 GRIK3Q13003 919 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 COL9A2Q14055 689 aaPredicted RBP5.54□□□□□ -1.52
CD44-218ENST00000525469 PDIA5Q14554 519 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 NAALADL2Q58DX5 795 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 FAM47CQ5HY64 1035 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 TLK2Q86UE8 772 aa5.54□□□□□ -1.52
CD44-218ENST00000525469 SULF2Q8IWU5 870 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms