RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 SP100P23497 879 aaPredicted RBP20.4■□□□□ 0.86
CAPN1-203ENST00000525013 GUCY2CP25092 1073 aa20.4■□□□□ 0.86
CAPN1-203ENST00000525013 MAPK7Q13164 816 aa20.4■□□□□ 0.86
CAPN1-203ENST00000525013 TUSC3Q13454 348 aa20.4■□□□□ 0.86
CAPN1-203ENST00000525013 SF3A1Q15459 793 aaKnown RBP20.4■□□□□ 0.86
CAPN1-203ENST00000525013 PHLPP2Q6ZVD8 1323 aa20.4■□□□□ 0.86
CAPN1-203ENST00000525013 KCTD17Q8N5Z5 321 aa20.4■□□□□ 0.86
CAPN1-203ENST00000525013 RASSF8Q8NHQ8 419 aa20.4■□□□□ 0.86
CAPN1-203ENST00000525013 CALML4Q96GE6 196 aa20.4■□□□□ 0.86
CAPN1-203ENST00000525013 MRPL4Q9BYD3 311 aaKnown RBP20.4■□□□□ 0.86
CAPN1-203ENST00000525013 FOXD4L1Q9NU39 408 aa20.4■□□□□ 0.86
CAPN1-203ENST00000525013 ADAM28Q9UKQ2 775 aa20.4■□□□□ 0.86
CAPN1-203ENST00000525013 CASTOR2A6NHX0 329 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 PTGESO14684 152 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 SLC12A3P55017 1021 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 HSP90AA2PQ14568 343 aaPredicted RBP20.39■□□□□ 0.85
CAPN1-203ENST00000525013 TMEM119Q4V9L6 283 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 KANK3Q6NY19 840 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 FUT10Q6P4F1 479 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 B3GALT6Q96L58 329 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 FBXL18Q96ME1 805 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 ACO2Q99798 780 aaKnown RBP20.39■□□□□ 0.85
CAPN1-203ENST00000525013 TCHPQ9BT92 498 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 TARS2Q9BW92 718 aaKnown RBP20.39■□□□□ 0.85
CAPN1-203ENST00000525013 GPR62Q9BZJ7 368 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 CXCL16Q9H2A7 254 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 TMEM134Q9H6X4 195 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 C17orf75Q9HAS0 396 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 TSHZ2Q9NRE2 1034 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 ARHGAP28Q9P2N2 729 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 TNFSF13BQ9Y275 285 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 CITO14578 2027 aa20.39■□□□□ 0.85
CAPN1-203ENST00000525013 ADH1AP07327 375 aa20.38■□□□□ 0.85
CAPN1-203ENST00000525013 SYT1P21579 422 aa20.38■□□□□ 0.85
CAPN1-203ENST00000525013 MTHFRP42898 656 aa20.38■□□□□ 0.85
CAPN1-203ENST00000525013 SMTNP53814 917 aa20.38■□□□□ 0.85
CAPN1-203ENST00000525013 DSG1Q02413 1049 aa20.38■□□□□ 0.85
CAPN1-203ENST00000525013 DHX8Q14562 1220 aaKnown RBP20.38■□□□□ 0.85
CAPN1-203ENST00000525013 ZNF568Q3ZCX4 644 aa20.38■□□□□ 0.85
CAPN1-203ENST00000525013 KIAA0319Q5VV43 1072 aa20.38■□□□□ 0.85
CAPN1-203ENST00000525013 TMC5Q6UXY8 1006 aa20.38■□□□□ 0.85
CAPN1-203ENST00000525013 ZBTB33Q86T24 672 aa20.38■□□□□ 0.85
CAPN1-203ENST00000525013 RIPOR3Q96MK2 946 aa20.38■□□□□ 0.85
CAPN1-203ENST00000525013 NECTIN4Q96NY8 510 aa20.38■□□□□ 0.85
CAPN1-203ENST00000525013 PAAF1Q9BRP4 392 aa20.38■□□□□ 0.85
CAPN1-203ENST00000525013 KCND2Q9NZV8 630 aa20.38■□□□□ 0.85
CAPN1-203ENST00000525013 KCNG1Q9UIX4 513 aa20.38■□□□□ 0.85
CAPN1-203ENST00000525013 PLXNA3P51805 1871 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 NPHP3-ACAD11A0A0J9YXS1 232 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 TEX28O15482 410 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 SLC26A4O43511 780 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 EFEMP2O95967 443 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 PLS3P13797 630 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 LONP1P36776 959 aaKnown RBP20.37■□□□□ 0.85
CAPN1-203ENST00000525013 CLCN4P51793 760 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 GRIN1Q05586 938 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 STRN3Q13033 797 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 USP41Q3LFD5 358 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 HERC4Q5GLZ8 1057 aaPredicted RBP20.37■□□□□ 0.85
CAPN1-203ENST00000525013 ATAT1Q5SQI0 421 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 TAS1R3Q7RTX0 852 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 RNF168Q8IYW5 571 aaPredicted RBP20.37■□□□□ 0.85
CAPN1-203ENST00000525013 HASPINQ8TF76 798 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 SPIRE2Q8WWL2 714 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 RIN2Q8WYP3 895 aaPredicted RBP20.37■□□□□ 0.85
CAPN1-203ENST00000525013 POMKQ9H5K3 350 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 DAXXQ9UER7 740 aaPredicted RBP20.37■□□□□ 0.85
CAPN1-203ENST00000525013 NR2E1Q9Y466 385 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 CLIC4Q9Y696 253 aa20.37■□□□□ 0.85
CAPN1-203ENST00000525013 SF3B1O75533 1304 aaKnown RBP eCLIP20.36■□□□□ 0.854e-6■■■■■ 34.1
CAPN1-203ENST00000525013 MTCL1Q9Y4B5 1905 aaKnown RBP20.36■□□□□ 0.85
CAPN1-203ENST00000525013 HARSP12081 509 aaKnown RBP20.36■□□□□ 0.85
CAPN1-203ENST00000525013 YARSP54577 528 aaKnown RBP20.36■□□□□ 0.85
CAPN1-203ENST00000525013 OSTNP61366 133 aa20.36■□□□□ 0.85
CAPN1-203ENST00000525013 CACNB1Q02641 598 aaPredicted RBP20.36■□□□□ 0.85
CAPN1-203ENST00000525013 KARSQ15046 597 aaKnown RBP20.36■□□□□ 0.85
CAPN1-203ENST00000525013 GLRA4Q5JXX5 417 aa20.36■□□□□ 0.85
CAPN1-203ENST00000525013 GPBP1Q86WP2 473 aa20.36■□□□□ 0.85
CAPN1-203ENST00000525013 INTS4Q96HW7 963 aaKnown RBP20.36■□□□□ 0.85
CAPN1-203ENST00000525013 NTPCRQ9BSD7 190 aaKnown RBP20.36■□□□□ 0.85
CAPN1-203ENST00000525013 CCDC94Q9BW85 323 aaPredicted RBP20.36■□□□□ 0.85
CAPN1-203ENST00000525013 CDT1Q9H211 546 aa20.36■□□□□ 0.85
CAPN1-203ENST00000525013 SFXN1Q9H9B4 322 aa20.36■□□□□ 0.85
CAPN1-203ENST00000525013 CHST7Q9NS84 486 aa20.36■□□□□ 0.85
CAPN1-203ENST00000525013 TECTAO75443 2155 aa20.35■□□□□ 0.85
CAPN1-203ENST00000525013 PRR33A8MZF0 331 aa20.35■□□□□ 0.85
CAPN1-203ENST00000525013 K7ELQ4 463 aaPredicted RBP20.35■□□□□ 0.85
CAPN1-203ENST00000525013 KIF4AO95239 1232 aa20.35■□□□□ 0.85
CAPN1-203ENST00000525013 MYBP10242 640 aa20.35■□□□□ 0.85
CAPN1-203ENST00000525013 PLCG1P19174 1290 aa20.35■□□□□ 0.85
CAPN1-203ENST00000525013 CEBPZQ03701 1054 aaKnown RBP20.35■□□□□ 0.85
CAPN1-203ENST00000525013 ARSHQ5FYA8 562 aa20.35■□□□□ 0.85
CAPN1-203ENST00000525013 GLYCTKQ8IVS8 523 aa20.35■□□□□ 0.85
CAPN1-203ENST00000525013 CEP120Q8N960 986 aa20.35■□□□□ 0.85
CAPN1-203ENST00000525013 RXFP1Q9HBX9 757 aa20.35■□□□□ 0.85
CAPN1-203ENST00000525013 PTPRHQ9HD43 1115 aa20.35■□□□□ 0.85
CAPN1-203ENST00000525013 MAN1C1Q9NR34 630 aa20.35■□□□□ 0.85
CAPN1-203ENST00000525013 TOPORSQ9NS56 1045 aaPredicted RBP20.35■□□□□ 0.85
CAPN1-203ENST00000525013 C2orf16Q68DN1 1984 aa20.34■□□□□ 0.85
CAPN1-203ENST00000525013 GLUD1P00367 558 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms