RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 GRM5P41594 1212 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 MRE11P49959 708 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 RAB27AP51159 221 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 CYP24A1Q07973 514 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 DSC3Q14574 896 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 GPNMBQ14956 572 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 PLEKHG4Q58EX7 1191 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 DCAF17Q5H9S7 520 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 CRELD2Q6UXH1 353 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 DEFB128Q7Z7B8 93 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 HACE1Q8IYU2 909 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 ADAM2Q99965 735 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 TUBGCP2Q9BSJ2 902 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 CCDC94Q9BW85 323 aaPredicted RBP17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 TAB2Q9NYJ8 693 aa17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 CPSF3Q9UKF6 684 aaKnown RBP17.23■□□□□ 0.35
TSPAN4-213ENST00000524895 PES1O00541 588 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 MGEA5O60502 916 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 FANCCQ00597 558 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 PPP2R3AQ06190 1150 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 BFSP1Q12934 665 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 MAN2A1Q16706 1144 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 TCERG1LQ5VWI1 586 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 FAM43BQ6ZT52 329 aaPredicted RBP17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 USP37Q86T82 979 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 BRSK2Q8IWQ3 736 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 TRIM59Q8IWR1 403 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 TMEM199Q8N511 208 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 DBF4BQ8NFT6 615 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 MFSD14AQ96MC6 490 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 NXF3Q9H4D5 531 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 RPF1Q9H9Y2 349 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 FAM105AQ9NUU6 356 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 IPPQ9Y573 584 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 PCDHB2Q9Y5E7 798 aa17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.22■□□□□ 0.35
TSPAN4-213ENST00000524895 EVI5O60447 810 aa17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 SKIP12755 728 aa17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 VAMP7P51809 220 aa17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 COPB1P53618 953 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 YARSP54577 528 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 ENOX2Q16206 610 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 FILIP1LQ4L180 1135 aa17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 MFSD5Q6N075 450 aa17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 SARM1Q6SZW1 724 aa17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 TMEM192Q8IY95 271 aa17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 CCDC127Q96BQ5 260 aa17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 BORCS6Q96GS4 357 aa17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 ACAP3Q96P50 834 aa17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 TRAIPQ9BWF2 469 aa17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 APOL6Q9BWW8 343 aa17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 VPS16Q9H269 839 aa17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 SNTG2Q9NY99 539 aa17.21■□□□□ 0.35
TSPAN4-213ENST00000524895 SCN5AQ14524 2016 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 CBFA2T2O43439 604 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 IL18RAPO95256 599 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 TRIM49P0CI25 452 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 TRIM49CP0CI26 452 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 CXCL8P10145 99 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 IBSPP21815 317 aaPredicted RBP17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 ITGB8P26012 769 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 POU5F1Q01860 360 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 PSMD6Q15008 389 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 SMG8Q8ND04 991 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 TMC2Q8TDI7 906 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 FAM212AQ96EL1 285 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 FNBP1Q96RU3 617 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 TRIM5Q9C035 493 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 RGS18Q9NS28 235 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 TOPORSQ9NS56 1045 aaPredicted RBP17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 C1orf112Q9NSG2 853 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 IFNKQ9P0W0 207 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 HES2Q9Y543 173 aa17.2■□□□□ 0.34
TSPAN4-213ENST00000524895 STX10O60499 249 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 RECQL4O94761 1208 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 AFPP02771 609 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 TPM3P06753 285 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 DLATP10515 647 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 ITGA4P13612 1032 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 CSF2RAP15509 400 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 UBASH3AP57075 661 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 ENPEPQ07075 957 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 SURF1Q15526 300 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 VWA3BQ502W6 1294 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 CNKSR3Q6P9H4 555 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 SLC24A5Q71RS6 500 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 APTXQ7Z2E3 356 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 RNF169Q8NCN4 708 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 PLEKHO2Q8TD55 490 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 PARD3BQ8TEW8 1205 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 LINC01599Q8WXQ3 324 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 SLC35C1Q96A29 364 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 PGBD4Q96DM1 585 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 TSPYL2Q9H2G4 693 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 PDE11AQ9HCR9 933 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 PARP2Q9UGN5 583 aa17.19■□□□□ 0.34
TSPAN4-213ENST00000524895 A0A0U1RQF3 1178 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 A0A1B0GTH6 734 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 LRRC10BA6NIK2 292 aa17.18■□□□□ 0.34
TSPAN4-213ENST00000524895 LRRIQ3A6PVS8 624 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms