RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 EPM2AIP1Q7L775 607 aaPredicted RBP11.11□□□□□ -0.63
CTSC-203ENST00000524463 ACSF2Q96CM8 615 aaPredicted RBP11.11□□□□□ -0.63
CTSC-203ENST00000524463 CHORDC1Q9UHD1 332 aaPredicted RBP11.11□□□□□ -0.63
CTSC-203ENST00000524463 MAFGO15525 162 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 SFNP31947 248 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 NAALADL2Q58DX5 795 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 PPP1R18Q6NYC8 613 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 RRM2BQ7LG56 351 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 TBC1D1Q86TI0 1168 aaPredicted RBP11.1□□□□□ -0.63
CTSC-203ENST00000524463 DGKHQ86XP1 1220 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 SP8Q8IXZ3 490 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 ZNF280CQ8ND82 737 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 RBM41Q96IZ5 413 aaKnown RBP11.1□□□□□ -0.63
CTSC-203ENST00000524463 TRIM15Q9C019 465 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 UPF3AQ9H1J1 476 aaKnown RBP11.1□□□□□ -0.63
CTSC-203ENST00000524463 MTIF3Q9H2K0 278 aaKnown RBP11.1□□□□□ -0.63
CTSC-203ENST00000524463 TRAF3IP3Q9Y228 551 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 COG2Q14746 738 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 AARS2Q5JTZ9 985 aaKnown RBP11.1□□□□□ -0.63
CTSC-203ENST00000524463 VSTM4Q8IW00 320 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 LINC00116Q8NCU8 138 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 SEPT8Q92599 483 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 TRIM55Q9BYV6 548 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 RRAGCQ9HB90 399 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 SYTL2Q9HCH5 934 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 PCDHA10Q9Y5I2 948 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 GCC2Q8IWJ2 1684 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 KRT14P02533 472 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 PWP1Q13610 501 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 ARHGEF7Q14155 803 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 LRRC8EQ6NSJ5 796 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 SLC7A14Q8TBB6 771 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 PARD6BQ9BYG5 372 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 MAGEB5Q9BZ81 275 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 ABCB6Q9NP58 842 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 PNMA8BQ9ULN7 279 aaPredicted RBP11.1□□□□□ -0.63
CTSC-203ENST00000524463 APOBEC2Q9Y235 224 aaKnown RBP11.1□□□□□ -0.63
CTSC-203ENST00000524463 ADGRL2O95490 1459 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 KDM5CP41229 1560 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 PBRM1Q86U86 1689 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 NDUFB5O43674 189 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 KRT37O76014 449 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 CHGBP05060 677 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 GFAPP14136 432 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 TOB2Q14106 344 aaPredicted RBP11.1□□□□□ -0.63
CTSC-203ENST00000524463 TCEA2Q15560 299 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 C10orf120Q5SQS8 335 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 EFCAB12Q6NXP0 572 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 HAUS6Q7Z4H7 955 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 PITPNM3Q9BZ71 974 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 ZNF212Q9UDV6 495 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 ARHGEF12Q9NZN5 1544 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 LRG1P02750 347 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 SMARCA1P28370 1054 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 TMEM132DQ14C87 1099 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 RAB42Q8N4Z0 105 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 NAF1Q96HR8 494 aaKnown RBP11.1□□□□□ -0.63
CTSC-203ENST00000524463 AGBL1Q96MI9 1066 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 IP6K2Q9UHH9 426 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 GGT7Q9UJ14 662 aa11.1□□□□□ -0.63
CTSC-203ENST00000524463 TADA3O75528 432 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 GH1P01241 217 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 POLE2P56282 527 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 PDAP1Q13442 181 aaKnown RBP11.09□□□□□ -0.63
CTSC-203ENST00000524463 EFTUD2Q15029 972 aaKnown RBP eCLIP11.09□□□□□ -0.63
CTSC-203ENST00000524463 DUOXA2Q1HG44 320 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 SYT2Q8N9I0 419 aaPredicted RBP11.09□□□□□ -0.63
CTSC-203ENST00000524463 SH3TC2Q8TF17 1288 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 KIFC3Q9BVG8 833 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 TRIM54Q9BYV2 358 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 SOAT1P35610 550 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 MAP2K2P36507 400 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 ARMC6Q6NXE6 501 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 ZNF560Q96MR9 790 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 WEE2P0C1S8 567 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 FGFR4P22455 802 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 MORF4L2Q15014 288 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 TAF11Q15544 211 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 PPP1R2P3Q6NXS1 205 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 RHOT2Q8IXI1 618 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 BTBD6Q96KE9 485 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 SERPINI1Q99574 410 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 PI4K2AQ9BTU6 479 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 RUBCNLQ9H714 662 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 MYOZ2Q9NPC6 264 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 CEP72Q9P209 647 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 CDV3Q9UKY7 258 aaKnown RBP11.09□□□□□ -0.63
CTSC-203ENST00000524463 NPM3O75607 178 aaKnown RBP11.09□□□□□ -0.63
CTSC-203ENST00000524463 PGK2P07205 417 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 MZF1P28698 734 aaPredicted RBP11.09□□□□□ -0.63
CTSC-203ENST00000524463 PDCLQ13371 301 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 PPP4R3CPQ6ZMV5 832 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 ENOX1Q8TC92 643 aaKnown RBP11.09□□□□□ -0.63
CTSC-203ENST00000524463 CERKQ8TCT0 537 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 FAM136AQ96C01 138 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 ING2Q9H160 280 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 HSPBP1Q9NZL4 362 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 V9GYQ6 96 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 NEO1Q92859 1461 aa11.09□□□□□ -0.63
CTSC-203ENST00000524463 HSPA8P11142 646 aaKnown RBP11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms